Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 4.4e-55 217.6 103 100.0
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 3.7e-54 214.5 103 99.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 3.7e-54 214.5 103 99.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 8.3e-54 213.4 103 98.1
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.5e-50 201.8 103 92.2
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.6e-50 200.7 103 91.3
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.2e-39 166.4 103 76.7
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-36 156.4 106 75.5
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.2e-36 156.4 112 71.4
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-36 156.0 106 74.5
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 3.5e-36 154.8 100 80.0
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 4.6e-36 154.5 103 70.9
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-36 153.7 108 72.2
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-36 153.7 108 72.2
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-36 153.7 108 72.2
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-35 153.3 106 74.5
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.3e-35 152.9 104 75.0
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.7e-35 152.5 103 73.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 9.5e-34 146.7 103 71.8
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.6e-33 146.0 108 71.3
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 3.6e-33 144.8 103 69.9
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 8.1e-33 143.7 99 67.7
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.4e-32 142.9 105 65.7
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.8e-32 142.5 109 67.9
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.8e-32 142.5 104 71.2
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.3e-32 142.1 88 75.0
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 4.0e-32 141.4 104 70.2
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.0e-32 141.4 103 68.9
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 4.0e-32 141.4 101 66.3
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 5.2e-32 141.0 103 69.9
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 8.9e-32 140.2 108 68.5
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-31 138.3 92 73.9
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 7.5e-31 137.1 103 69.9
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.5e-31 137.1 100 68.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.5e-31 137.1 103 68.9
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.3e-30 136.3 107 64.5
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 3.7e-30 134.8 106 67.0
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 3.7e-30 134.8 109 63.3
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.4e-30 134.0 103 68.0
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 6.4e-30 134.0 103 64.1
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 6.4e-30 134.0 103 65.0
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 1.4e-29 132.9 103 65.0
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.9e-29 132.5 103 60.2
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.9e-29 132.5 103 63.1
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 3.2e-29 131.7 103 65.0
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 4.1e-29 131.3 110 60.9
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.1e-29 130.6 103 65.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 7.1e-29 130.6 103 62.1
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 7.1e-29 130.6 103 61.2
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-28 129.8 107 61.7
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-28 129.8 107 61.7
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 65.0
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 65.0
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 66.0
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.6e-28 129.4 105 63.8
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.6e-28 129.4 103 63.1
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 2.1e-28 129.0 104 63.5
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.5e-28 128.3 67 86.6
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 62.1
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 64.1
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 4.6e-28 127.9 103 61.2
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 6.0e-28 127.5 103 61.2
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 6.0e-28 127.5 103 64.1
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 6.0e-28 127.5 106 64.2
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 7.8e-28 127.1 104 65.4
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 7.8e-28 127.1 100 61.0
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 59.2
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.3e-27 126.3 107 63.6
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 65.0
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 2.3e-27 125.6 111 57.7
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 2.3e-27 125.6 109 60.6
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 3.9e-27 124.8 73 82.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 3.9e-27 124.8 103 64.1
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 5.1e-27 124.4 103 61.2
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 6.6e-27 124.0 110 60.0
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.1e-26 123.2 106 59.4
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 1.5e-26 122.9 104 58.7
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 1.5e-26 122.9 103 61.2
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 63.1
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 63.1
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.5e-26 122.1 103 62.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.5e-26 122.1 103 62.1
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 2.5e-26 122.1 103 62.1
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 62.1
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 5.6e-26 120.9 103 63.1
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 5.6e-26 120.9 109 60.6
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 7.3e-26 120.6 106 59.4
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 7.3e-26 120.6 103 60.2
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 7.3e-26 120.6 106 62.3
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 7.3e-26 120.6 103 58.3
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.5e-26 120.2 103 61.2
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 9.5e-26 120.2 105 59.0
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 2.1e-25 119.0 104 62.5
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 2.1e-25 119.0 103 62.1
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 60.2
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 3.6e-25 118.2 108 59.3
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.7e-25 117.9 105 57.1
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 8.1e-25 117.1 105 61.9
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 8.1e-25 117.1 106 58.5
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 5.2e-24 114.4 119 53.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 8.9e-24 113.6 107 60.7
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 2.0e-23 112.5 106 55.7
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 2.6e-23 112.1 103 58.3
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.3e-22 109.8 110 56.4
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 6.4e-22 107.5 103 51.5
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 6.4e-22 107.5 84 66.7
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.1e-21 106.7 66 74.2
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 9.2e-21 103.6 103 53.4
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.0e-19 100.1 64 71.9
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 2.3e-19 99.0 103 51.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 4.8e-17 91.3 55 81.8
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.1e-16 90.1 85 48.2
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.4e-16 89.7 98 51.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.8e-16 89.4 87 51.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 7.6e-15 84.0 52 67.3
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 9.9e-15 83.6 134 38.8
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.3e-14 83.2 113 41.6
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 3.8e-14 81.6 87 49.4
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.4e-13 79.7 71 53.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.4e-13 79.7 64 54.7
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 6.6e-11 70.9 115 40.9
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.1e-10 70.1 44 68.2
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 9.6e-10 67.0 67 53.7


User provided reference genes

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