Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g076887.1 Solanum lycopersicum HOM05D008363 ORTHO05D010508 7.7e-94 347.1 166 100.0
Actinidia14803 Actinidia chinensis HOM05D008363 ORTHO05D010508 5.8e-41 171.4 165 49.7
Dinv28961 Davidia involucrata HOM05D008363 ORTHO05D010508 2.4e-39 166.0 131 55.7
Oeu006320.1 Olea europaea HOM05D008363 ORTHO05D010508 3.2e-39 165.6 148 54.7
Migut.A01011 Erythranthe guttata HOM05D008363 ORTHO05D010508 5.1e-37 158.3 143 53.1
Hma1.2p1_0303F.1_g119070 Hydrangea macrophylla HOM05D008363 ORTHO05D010508 1.6e-35 153.3 140 49.3
Cc08_g02830 Coffea canephora HOM05D008363 ORTHO05D010508 6.2e-35 151.4 162 49.4
MD06G1034800 Malus domestica HOM05D008363 ORTHO05D010508 1.0e-32 144.1 149 46.3
MD16G1273800 Malus domestica HOM05D008363 ORTHO05D010508 1.0e-32 144.1 147 49.0
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 2.2e-32 142.9 156 46.2
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 7.1e-31 137.9 139 47.5
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 1.6e-30 136.7 130 49.2
CSS0023279 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 2.1e-30 136.3 114 55.3
CSS0031173 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 2.1e-30 136.3 114 55.3
Potri.001G141900 Populus trichocarpa HOM05D008363 ORTHO05D010508 7.9e-30 134.4 127 48.0
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 3.0e-29 132.5 143 48.3
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 8.7e-29 131.0 129 48.8
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 1.5e-28 130.2 129 50.4
Duzib084G1116 Durio zibethinus HOM05D008363 ORTHO05D010508 1.9e-28 129.8 130 49.2
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 4.3e-28 128.6 149 43.6
Gohir.A03G000300 Gossypium hirsutum HOM05D008363 ORTHO05D010508 5.7e-28 128.3 129 48.8
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 9.6e-28 127.5 131 44.3
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 1.3e-27 127.1 139 44.6
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 4.8e-27 125.2 128 47.7
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.8e-27 125.2 128 47.7
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.8e-27 125.2 128 47.7
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.8e-27 125.2 128 47.7
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.1e-26 124.0 128 46.9
Manes.05G195161 Manihot esculenta HOM05D008363 ORTHO05D010508 1.1e-26 124.0 139 44.6
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 1.4e-26 123.6 126 44.4
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 1.8e-26 123.2 154 40.3
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 3.1e-26 122.5 128 43.8
DCAR_024961 Daucus carota HOM05D008363 ORTHO05D010508 4.0e-26 122.1 133 42.9
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 6.9e-26 121.3 137 45.3
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 1.5e-25 120.2 144 41.0
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 2.6e-25 119.4 163 41.1
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 4.5e-25 118.6 128 43.0
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 2.9e-24 115.9 138 42.0
COL.COLO4_17025 Corchorus olitorius HOM05D008363 ORTHO05D010508 1.4e-23 113.6 127 41.7
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 3.2e-23 112.5 126 46.0
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 9.7e-20 100.9 135 37.0
Potri.014G146500 Populus trichocarpa HOM05D008363 ORTHO05D010508 1.3e-19 100.5 127 38.6
DCAR_005636 Daucus carota HOM05D008363 ORTHO05D010508 2.8e-19 99.4 132 39.4
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 3.1e-18 95.9 115 38.3
DCAR_008265 Daucus carota HOM05D008363 ORTHO05D010508 7.7e-17 91.3 133 36.1
Lsat_1_v5_gn_6_79301 Lactuca sativa HOM05D008363 ORTHO05D010508 1.1e-15 87.4 74 43.2
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.7e-12 75.1 89 37.1
SMO239G0014 Selaginella moellendorffii HOM05D001991 ORTHO05D002030 2.2e-08 63.2 129 27.9
Duzib084G0653 Durio zibethinus HOM05D008363 ORTHO05D010508 2.1e-06 56.6 52 55.8


User provided reference genes

Program Settings