Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.1e-83 313.2 151 100.0
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.4e-30 136.7 77 93.5
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 6.7e-28 127.9 80 87.5
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 5.7e-27 124.8 80 85.0
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 4.5e-24 115.2 80 77.5
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 1.2e-21 107.1 80 75.0
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.8e-20 103.2 80 71.2
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 8.8e-20 100.9 70 72.9
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 4.4e-19 98.6 78 69.2
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.3e-18 97.1 74 71.6
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 1.7e-18 96.7 74 71.6
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 2.2e-18 96.3 69 66.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 2.8e-18 95.9 77 68.8
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 2.8e-18 95.9 77 68.8
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 2.8e-18 95.9 77 68.8
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 2.8e-18 95.9 72 69.4
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 2.8e-18 95.9 76 69.7
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 3.7e-18 95.5 73 72.6
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.8e-18 95.1 78 67.9
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.8e-18 95.1 78 67.9
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 8.2e-18 94.4 79 67.1
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 8.2e-18 94.4 77 67.5
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 8.2e-18 94.4 77 67.5
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.1e-17 94.0 81 65.4
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 1.1e-17 94.0 81 64.2
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.1e-17 94.0 73 68.5
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 1.4e-17 93.6 73 68.5
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.8e-17 93.2 82 64.6
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 1.8e-17 93.2 77 66.2
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.1e-17 92.4 73 69.9
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 3.1e-17 92.4 73 69.9
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 4.1e-17 92.0 81 63.0
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 4.1e-17 92.0 81 63.0
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 4.1e-17 92.0 72 63.9
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 4.1e-17 92.0 73 69.9
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 7.0e-17 91.3 73 67.1
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 9.1e-17 90.9 64 71.9
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 9.1e-17 90.9 73 69.9
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 9.1e-17 90.9 73 63.0
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.2e-16 90.5 58 77.6
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.2e-16 90.5 58 77.6
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 1.6e-16 90.1 81 64.2
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 2.0e-16 89.7 82 63.4
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 2.6e-16 89.4 74 66.2
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 3.5e-16 89.0 76 61.8
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 3.5e-16 89.0 73 65.8
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 4.5e-16 88.6 77 59.7
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 4.5e-16 88.6 73 64.4
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 5.9e-16 88.2 73 65.8
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 5.9e-16 88.2 72 63.9
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 5.9e-16 88.2 73 64.4
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 5.9e-16 88.2 73 65.8
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 5.9e-16 88.2 82 62.2
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 5.9e-16 88.2 82 62.2
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 5.9e-16 88.2 73 64.4
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 5.9e-16 88.2 77 66.2
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 7.7e-16 87.8 79 60.8
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 7.7e-16 87.8 73 64.4
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 7.7e-16 87.8 80 61.2
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 7.7e-16 87.8 73 65.8
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 1.0e-15 87.4 73 63.0
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 1.0e-15 87.4 73 68.5
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 1.0e-15 87.4 78 64.1
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 1.0e-15 87.4 78 64.1
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 1.0e-15 87.4 79 60.8
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.0e-15 87.4 52 84.6
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 1.0e-15 87.4 72 68.1
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.3e-15 87.0 73 67.1
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 1.3e-15 87.0 84 59.5
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 1.3e-15 87.0 73 67.1
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 1.3e-15 87.0 82 62.2
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 1.3e-15 87.0 77 62.3
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.2e-15 86.3 74 63.5
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 2.2e-15 86.3 80 62.5
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 2.9e-15 85.9 74 63.5
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.9e-15 85.9 74 63.5
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.9e-15 85.9 74 63.5
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 2.9e-15 85.9 80 60.0
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 2.9e-15 85.9 73 64.4
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 3.8e-15 85.5 73 64.4
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 3.8e-15 85.5 73 64.4
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 3.8e-15 85.5 73 64.4
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 8.5e-15 84.3 74 67.6
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.1e-14 84.0 72 62.5
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 1.1e-14 84.0 73 61.6
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 1.1e-14 84.0 80 61.2
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 1.1e-14 84.0 80 62.5
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.1e-14 84.0 83 57.8
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 1.5e-14 83.6 73 64.4
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.5e-14 83.6 76 63.2
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 1.9e-14 83.2 73 61.6
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 2.5e-14 82.8 69 63.8
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 2.5e-14 82.8 76 61.8
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 5.5e-14 81.6 73 63.0
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 9.4e-14 80.9 75 62.7
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 2.1e-13 79.7 69 58.0
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 2.1e-13 79.7 73 61.6
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 4.7e-13 78.6 76 60.5
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 4.7e-13 78.6 79 57.0
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 4.7e-13 78.6 69 58.0
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 3.0e-12 75.9 77 57.1
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 6.7e-12 74.7 72 56.9
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 3.3e-11 72.4 74 52.7
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 1.3e-10 70.5 57 64.9
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.3e-10 70.5 78 52.6
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 4.8e-10 68.6 67 50.7
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 8.2e-10 67.8 57 59.6
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.1e-09 67.4 56 57.1
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.4e-09 67.0 48 68.8
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 7.0e-09 64.7 44 65.9
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 8.5e-07 57.8 69 42.0
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 4.2e-06 55.5 65 40.0
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 7.2e-06 54.7 48 47.9


User provided reference genes

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