Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g076510.3 Solanum lycopersicum HOM05D002388 ORTHO05D004745 6.5e-108 394.0 196 100.0
Sopen08g025090 Solanum pennellii HOM05D002388 ORTHO05D004745 6.5e-108 394.0 196 100.0
PGSC0003DMG400014808 Solanum tuberosum HOM05D002388 ORTHO05D004745 3.1e-102 375.2 199 95.0
Nitab4.5_0000529g0040 Nicotiana tabacum HOM05D002388 ORTHO05D004745 3.6e-90 335.1 201 84.6
Peaxi162Scf00170g00816 Petunia axillaris HOM05D002388 ORTHO05D004745 5.2e-89 331.3 201 84.1
Nitab4.5_0001595g0030 Nicotiana tabacum HOM05D002388 ORTHO05D004745 8.9e-89 330.5 201 83.6
Dinv28990 Davidia involucrata HOM05D002388 ORTHO05D004745 7.8e-61 237.7 206 60.2
CAN.G1298.37 Capsicum annuum HOM05D002388 ORTHO05D004745 8.1e-58 227.6 163 74.2
Actinidia03351 Actinidia chinensis HOM05D002388 ORTHO05D004745 2.4e-57 226.1 205 60.0
CSS0030959 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D004745 5.2e-57 224.9 202 59.4
Dinv25247 Davidia involucrata HOM05D002388 ORTHO05D004745 1.5e-56 223.4 209 57.4
Hma1.2p1_0572F.1_g181220 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 7.1e-54 214.5 201 55.7
Potri.003G095600 Populus trichocarpa HOM05D002388 ORTHO05D004745 9.2e-54 214.2 209 56.0
FAN18G3398 Fragaria x ananassa HOM05D002388 ORTHO05D004745 7.8e-53 211.1 206 54.9
FAN18G3813 Fragaria x ananassa HOM05D002388 ORTHO05D004745 7.8e-53 211.1 206 54.9
Oeu028869.2 Olea europaea HOM05D002388 ORTHO05D004745 1.0e-52 210.7 259 48.6
vmacro00293 Vaccinium macrocarpon HOM05D002388 ORTHO05D004745 1.3e-52 210.3 201 57.7
vmacro00300 Vaccinium macrocarpon HOM05D002388 ORTHO05D004745 1.3e-52 210.3 201 57.7
COL.COLO4_16959 Corchorus olitorius HOM05D002388 ORTHO05D004745 1.7e-52 209.9 204 53.9
Atru.chr6.1616 Acer truncatum HOM05D002388 ORTHO05D004745 2.3e-52 209.5 197 55.8
SGA_v2.0_scaffold20G09262 Striga asiatica HOM05D002388 ORTHO05D004745 5.1e-52 208.4 198 57.1
FAN08G3109 Fragaria x ananassa HOM05D002388 ORTHO05D004745 6.6e-52 208.0 206 54.4
RcHm_v2.0_Chr7g0211591 Rosa chinensis HOM05D002388 ORTHO05D004745 8.7e-52 207.6 207 54.1
Cpa.g.sc90.11 Carica papaya HOM05D002388 ORTHO05D004745 1.1e-51 207.2 204 53.9
FAN04G3082 Fragaria x ananassa HOM05D002388 ORTHO05D004745 1.1e-51 207.2 206 53.9
MSTRG.13744 Avicennia marina HOM05D002388 ORTHO05D004745 3.3e-51 205.7 195 58.5
FvH4_5g22890 Fragaria vesca HOM05D002388 ORTHO05D004745 9.6e-51 204.1 213 53.1
Migut.E00774 Erythranthe guttata HOM05D002388 ORTHO05D004745 2.1e-50 203.0 196 57.7
FAN13G2852 Fragaria x ananassa HOM05D002388 ORTHO05D004745 2.1e-50 203.0 206 53.4
Nn1g00186 Nelumbo nucifera HOM05D002388 ORTHO05D004745 8.1e-50 201.1 203 53.2
Ca_22658_v3 Cicer arietinum L. HOM05D002388 ORTHO05D004745 1.1e-49 200.7 202 51.0
Ciclev10002550m.g Citrus clementina HOM05D002388 ORTHO05D004745 2.4e-49 199.5 198 56.1
Manes.15G188200 Manihot esculenta HOM05D002388 ORTHO05D004745 2.4e-49 199.5 197 53.8
Prupe.5G029700 Prunus persica HOM05D002388 ORTHO05D004745 2.4e-49 199.5 195 55.9
Ah.12g055410 Amaranthus hybridus HOM05D002388 ORTHO05D004745 5.3e-49 198.4 205 52.2
Potri.001G138200 Populus trichocarpa HOM05D002388 ORTHO05D004745 5.3e-49 198.4 209 53.6
Duzib205G0909 Durio zibethinus HOM05D002388 ORTHO05D004745 6.9e-49 198.0 204 52.5
Gohir.A08G154400 Gossypium hirsutum HOM05D002388 ORTHO05D004745 6.9e-49 198.0 203 53.7
Nn3g19408 Nelumbo nucifera HOM05D002388 ORTHO05D004745 6.9e-49 198.0 199 52.8
Cfa012514 Carpinus fangiana HOM05D002388 ORTHO05D004745 9.0e-49 197.6 197 54.8
GSVIVG01013067001 Vitis vinifera HOM05D002388 ORTHO05D004745 1.2e-48 197.2 205 53.2
Thecc.03G308500 Theobroma cacao HOM05D002388 ORTHO05D004745 2.0e-48 196.4 200 53.5
MSTRG.1999 Avicennia marina HOM05D002388 ORTHO05D004745 2.6e-48 196.1 199 54.8
Gohir.D08G175075 Gossypium hirsutum HOM05D002388 ORTHO05D004745 2.6e-48 196.1 203 54.2
TWI15G0743 Tripterygium wilfordii HOM05D002388 ORTHO05D004745 2.6e-48 196.1 200 49.5
Duzib068G1098 Durio zibethinus HOM05D002388 ORTHO05D004745 3.4e-48 195.7 203 51.7
arahy.Tifrunner.gnm1.ann1.DQ9IRR Arachis hypogaea HOM05D002388 ORTHO05D004745 4.4e-48 195.3 205 54.1
arahy.Tifrunner.gnm1.ann1.JAYF1A Arachis hypogaea HOM05D002388 ORTHO05D004745 4.4e-48 195.3 205 54.1
CsaV3_3G001460 Cucumis sativus L. HOM05D002388 ORTHO05D004745 9.9e-48 194.1 198 52.5
QL12p001291 Quercus lobata HOM05D002388 ORTHO05D004745 9.9e-48 194.1 197 53.8
EL10Ac5g12028 Beta vulgaris HOM05D002388 ORTHO05D004745 1.7e-47 193.4 210 53.3
HanXRQChr13g0419911 Helianthus annuus HOM05D002388 ORTHO05D004745 1.7e-47 193.4 202 53.0
Lj2g0009669 Lotus japonicus HOM05D002388 ORTHO05D004745 1.7e-47 193.4 198 54.5
Sc22g0001810 Simmondsia chinensis HOM05D002388 ORTHO05D004745 1.7e-47 193.4 206 51.5
Gorai.004G182900 Gossypium raimondii HOM05D002388 ORTHO05D004745 2.2e-47 193.0 200 53.0
TPR.G8093 Trifolium pratense HOM05D002388 ORTHO05D004745 2.2e-47 193.0 204 53.9
CiPaw.11G097400 Carya illinoinensis HOM05D002388 ORTHO05D004745 2.9e-47 192.6 203 52.7
Psat4g121840 Pisum sativum HOM05D002388 ORTHO05D004745 2.9e-47 192.6 202 50.5
Thhalv10008414m.g Eutrema salsugineum HOM05D002388 ORTHO05D004745 4.9e-47 191.8 199 48.7
Carub.0001s3059 Capsella rubella HOM05D002388 ORTHO05D004745 6.4e-47 191.4 198 48.0
THA.LOC104814421 Tarenaya hassleriana HOM05D002388 ORTHO05D004745 6.4e-47 191.4 205 50.7
BcaB07g32907 Brassica carinata HOM05D002388 ORTHO05D004745 1.1e-46 190.7 198 50.5
AUR62007343 Chenopodium quinoa HOM05D002388 ORTHO05D004745 1.1e-46 190.7 203 52.2
AUR62018656 Chenopodium quinoa HOM05D002388 ORTHO05D004745 1.1e-46 190.7 205 51.7
CANSAT35G0066 Cannabis sativa HOM05D002388 ORTHO05D004745 1.4e-46 190.3 207 53.6
TWI60G0128 Tripterygium wilfordii HOM05D002388 ORTHO05D004745 1.4e-46 190.3 204 51.0
Aa31LG9G15470 Aethionema arabicum HOM05D002388 ORTHO05D004745 1.9e-46 189.9 199 52.3
Medtr5g029600 Medicago truncatula HOM05D002388 ORTHO05D004745 1.9e-46 189.9 199 52.8
Haze_08151 Corylus avellana HOM05D002388 ORTHO05D004745 3.2e-46 189.1 212 50.5
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 4.2e-46 188.7 197 53.3
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 4.2e-46 188.7 223 48.9
PGR042G0491 Punica granatum HOM05D002388 ORTHO05D004745 5.4e-46 188.3 199 53.3
AT1G32260 Arabidopsis thaliana HOM05D002388 ORTHO05D004745 7.1e-46 188.0 199 48.7
Glyma.01G015300 Glycine max HOM05D002388 ORTHO05D004745 7.1e-46 188.0 201 51.2
Lsat_1_v5_gn_6_3520 Lactuca sativa HOM05D002388 ORTHO05D004745 7.1e-46 188.0 192 51.6
Hund14363 Selenicereus undatus HOM05D002388 ORTHO05D004745 7.1e-46 188.0 207 51.7
Lalb_Chr16g0381151 Lupinus albus HOM05D002388 ORTHO05D004745 9.3e-46 187.6 203 49.8
Rhsim11G0019800 Rhododendron simsii HOM05D002388 ORTHO05D004745 1.6e-45 186.8 272 42.6
A09p33880 Brassica napus HOM05D002388 ORTHO05D004745 2.1e-45 186.4 199 50.8
BraA09t38936Z Brassica rapa HOM05D002388 ORTHO05D004745 2.1e-45 186.4 199 50.8
Cc08_g03410 Coffea canephora HOM05D002388 ORTHO05D004745 4.6e-45 185.3 201 49.8
Psat2g138920 Pisum sativum HOM05D002388 ORTHO05D004745 4.6e-45 185.3 204 52.0
TPR.G3315 Trifolium pratense HOM05D002388 ORTHO05D004745 4.6e-45 185.3 202 50.5
ECA233G5493 Erigeron canadensis HOM05D002388 ORTHO05D004745 6.0e-45 184.9 197 53.3
PSO339G4108 Papaver somniferum HOM05D002388 ORTHO05D004745 6.0e-45 184.9 206 51.0
MD06G1025400 Malus domestica HOM05D002388 ORTHO05D004745 1.0e-44 184.1 200 51.5
Ca_25190_v3 Cicer arietinum L. HOM05D002388 ORTHO05D004745 3.0e-44 182.6 199 50.3
ClCG10G001380 Citrullus lanatus HOM05D002388 ORTHO05D004745 3.0e-44 182.6 198 51.5
C05p31720 Brassica napus HOM05D002388 ORTHO05D004745 3.9e-44 182.2 198 51.5
BolC5t31898H Brassica oleracea HOM05D002388 ORTHO05D004745 3.9e-44 182.2 198 51.5
Aa31LG2G13740 Aethionema arabicum HOM05D002388 ORTHO05D004745 5.1e-44 181.8 198 49.5
Eucgr.E00235 Eucalyptus grandis HOM05D002388 ORTHO05D004745 5.1e-44 181.8 200 50.0
BcaC05g27267 Brassica carinata HOM05D002388 ORTHO05D004745 1.1e-43 180.6 198 51.5
Sp4g17700 Schrenkiella parvula HOM05D002388 ORTHO05D004745 1.1e-43 180.6 199 52.8
Cfa012499 Carpinus fangiana HOM05D002388 ORTHO05D004745 1.5e-43 180.3 188 51.6
BcaB02g09426 Brassica carinata HOM05D002388 ORTHO05D004745 3.3e-43 179.1 200 51.0
Glyma.09G207100 Glycine max HOM05D002388 ORTHO05D004745 7.3e-43 177.9 203 51.2
THA.LOC104798489 Tarenaya hassleriana HOM05D002388 ORTHO05D004745 7.3e-43 177.9 204 47.1
VMungo1215G2489 Vigna mungo HOM05D002388 ORTHO05D004745 9.6e-43 177.6 196 50.5
HanXRQChr02g0049371 Helianthus annuus HOM05D002388 ORTHO05D004745 1.6e-42 176.8 195 50.3
Rhsim07G0131100 Rhododendron simsii HOM05D002388 ORTHO05D004745 2.1e-42 176.4 200 49.0
Cfa012512 Carpinus fangiana HOM05D002388 ORTHO05D004745 3.6e-42 175.6 197 52.3
Cfa021255 Carpinus fangiana HOM05D002388 ORTHO05D004745 3.6e-42 175.6 197 52.3
Gorai.003G184500 Gossypium raimondii HOM05D002388 ORTHO05D004745 3.6e-42 175.6 206 47.6
Gohir.D03G175500 Gossypium hirsutum HOM05D002388 ORTHO05D004745 4.8e-42 175.3 206 47.6
Lalb_Chr09g0325541 Lupinus albus HOM05D002388 ORTHO05D004745 6.2e-42 174.9 216 47.2
Ciclev10002623m.g Citrus clementina HOM05D002388 ORTHO05D004745 8.1e-42 174.5 198 51.0
CARHR031630 Cardamine hirsuta HOM05D002388 ORTHO05D004745 1.1e-41 174.1 201 47.3
Carub.0004s1717 Capsella rubella HOM05D002388 ORTHO05D004745 1.4e-41 173.7 197 49.7
AL4G31530 Arabidopsis lyrata HOM05D002388 ORTHO05D004745 1.8e-41 173.3 197 49.7
BcaC02g11653 Brassica carinata HOM05D002388 ORTHO05D004745 1.8e-41 173.3 197 50.8
C04p12700 Brassica napus HOM05D002388 ORTHO05D004745 1.8e-41 173.3 197 50.8
BolC4t22918H Brassica oleracea HOM05D002388 ORTHO05D004745 1.8e-41 173.3 197 50.8
CARHR129630 Cardamine hirsuta HOM05D002388 ORTHO05D004745 1.8e-41 173.3 199 47.2
Haze_08150 Corylus avellana HOM05D002388 ORTHO05D004745 2.4e-41 172.9 157 61.1
Haze_08172 Corylus avellana HOM05D002388 ORTHO05D004745 2.4e-41 172.9 195 53.3
Medtr8g066470 Medicago truncatula HOM05D002388 ORTHO05D004745 6.9e-41 171.4 208 47.1
PSO384G0605 Papaver somniferum HOM05D002388 ORTHO05D004745 9.0e-41 171.0 183 50.3
Lsat_1_v5_gn_6_95801 Lactuca sativa HOM05D002388 ORTHO05D004745 1.5e-40 170.2 221 45.2
Sp1g27940 Schrenkiella parvula HOM05D002388 ORTHO05D004745 2.6e-40 169.5 200 45.0
Phvul.002G137900 Phaseolus vulgaris HOM05D002388 ORTHO05D004745 4.5e-40 168.7 200 47.5
Thhalv10017272m.g Eutrema salsugineum HOM05D002388 ORTHO05D004745 1.7e-39 166.8 194 47.4
AT2G35480 Arabidopsis thaliana HOM05D002388 ORTHO05D004745 2.2e-39 166.4 197 48.7
SalBow1G6210 Salvia bowleyana HOM05D002388 ORTHO05D004745 2.2e-39 166.4 197 50.8
A05p10250 Brassica napus HOM05D002388 ORTHO05D004745 3.8e-39 165.6 198 47.5
BraA05t19965Z Brassica rapa HOM05D002388 ORTHO05D004745 3.8e-39 165.6 198 47.5
Gohir.A03G000041 Gossypium hirsutum HOM05D002388 ORTHO05D004745 6.4e-39 164.9 206 46.1
unitig_21.g20893 Utricularia gibba HOM05D005023 ORTHO05D004745 4.2e-38 162.2 212 47.6
Haze_09168 Corylus avellana HOM05D002388 ORTHO05D004745 2.3e-36 156.4 156 55.8
Sabra03G0064500 Salix brachista HOM05D002388 ORTHO05D004745 6.7e-36 154.8 332 34.6
Ciclev10003612m.g Citrus clementina HOM05D002388 ORTHO05D004745 1.1e-35 154.1 195 48.2
VMungo0251G2329 Vigna mungo HOM05D002388 ORTHO05D004745 3.3e-35 152.5 206 42.7
Ciclev10003879m.g Citrus clementina HOM05D002388 ORTHO05D004745 4.3e-35 152.1 195 47.7
Ciclev10003570m.g Citrus clementina HOM05D002388 ORTHO05D004745 9.6e-35 151.0 90 78.9
HPP92_025448 Vanilla planifolia HOM05D002388 ORTHO05D004745 4.8e-34 148.7 204 42.6
Sed0016521 Sechium edule HOM05D002388 ORTHO05D004745 3.1e-33 146.0 202 43.1
ATR0829G180 Amborella trichopoda HOM05D002388 ORTHO05D004745 4.0e-33 145.6 146 52.1
SEGI_33523 Sequoiadendron giganteum HOM05D002388 ORTHO05D004745 5.3e-33 145.2 90 78.9
CsaV3_3G048910 Cucumis sativus L. HOM05D002388 ORTHO05D004745 9.0e-33 144.4 202 41.1
PGR042G2052 Punica granatum HOM05D002388 ORTHO05D004745 1.2e-32 144.1 205 46.8
Phvul.003G283700 Phaseolus vulgaris HOM05D002388 ORTHO05D004745 2.6e-32 142.9 206 42.2
Zm00001eb208800 Zea mays HOM05D002388 ORTHO05D004745 5.8e-32 141.7 194 43.8
CDE02G3148 Ceratophyllum demersum HOM05D002388 ORTHO05D004745 7.6e-32 141.4 89 74.2
ECA240G1207 Erigeron canadensis HOM05D002388 ORTHO05D004745 2.2e-31 139.8 176 47.7
DCAR_008237 Daucus carota HOM05D002388 ORTHO05D004745 1.6e-29 133.7 156 46.8
Pp3c21_10750 Physcomitrium patens HOM05D002388 ORTHO05D004745 2.7e-29 132.9 127 54.3
Mapoly0149s0010 Marchantia polymorpha HOM05D002388 ORTHO05D004745 1.3e-28 130.6 90 65.6
DCAR_004282 Daucus carota HOM05D002388 ORTHO05D004745 1.8e-28 130.2 151 47.7
Pp3c18_19000 Physcomitrium patens HOM05D002388 ORTHO05D004745 6.7e-28 128.3 92 66.3
ClCG09G011710 Citrullus lanatus HOM05D002388 ORTHO05D004745 2.4e-25 119.8 203 38.4
Lj8A306G57 Lonicera japonica HOM05D002388 ORTHO05D004745 2.4e-25 119.8 155 44.5
SMO347G0656 Selaginella moellendorffii HOM05D002388 ORTHO05D004745 2.4e-25 119.8 138 50.7
AagrBONN_evm.TU.Sc2ySwM_362.667 Anthoceros agrestis HOM05D002388 ORTHO05D004745 3.1e-25 119.4 128 48.4
Hund11196 Selenicereus undatus HOM05D002388 ORTHO05D004745 1.2e-24 117.5 162 46.3
MELO3C013831.2 Cucumis melo HOM05D002388 ORTHO05D004745 7.6e-24 114.8 131 47.3
Ciclev10003604m.g Citrus clementina HOM05D002388 ORTHO05D004745 1.9e-22 110.2 151 41.7
Hma1.2p1_0870F.1_g230820 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 2.8e-18 96.3 124 43.5
Os02g0127900 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D004745 7.7e-16 88.2 148 37.8
Actinidia07899 Actinidia chinensis HOM05D002388 ORTHO05D004745 8.5e-15 84.7 73 60.3
Sed0007566 Sechium edule HOM05D002388 ORTHO05D004745 1.4e-14 84.0 193 37.3
Lj8C306G7 Lonicera japonica HOM05D002388 ORTHO05D004745 3.0e-12 76.3 56 69.6
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 8.8e-12 74.7 54 64.8
Hma1.2p1_0572F.1_g181210 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 1.7e-10 70.5 44 75.0
Hma1.2p1_3278F.1_g334816 Hydrangea macrophylla HOM05D002388 ORTHO05D004745 1.7e-10 70.5 44 75.0
SHI07361 Sapria himalayana HOM05D002388 ORTHO05D000131 2.8e-10 69.7 120 35.0
CBR_g48716 Chara braunii HOM05D002388 ORTHO05D004745 8.2e-10 68.2 79 48.1
SHI07360 Sapria himalayana HOM05D002388 ORTHO05D000001 1.2e-08 64.3 134 37.3
TPR.G3332 Trifolium pratense HOM05D000188 ORTHO05D000362 2.0e-08 63.5 96 36.5
Haze_08158 Corylus avellana HOM05D002388 ORTHO05D004745 1.3e-07 60.8 91 37.4
AL1G46410 Arabidopsis lyrata HOM05D002388 ORTHO05D004745 6.5e-07 58.5 117 32.5


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