Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 2.1e-166 589.0 300 100.0
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 8.9e-165 583.6 300 99.0
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 6.2e-150 534.3 300 91.3
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.3e-112 409.5 284 77.1
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.1e-109 400.6 283 76.3
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 3.8e-107 392.1 287 71.8
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.1e-77 294.3 298 57.7
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 3.5e-52 209.5 318 44.7
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 8.9e-48 194.9 315 43.5
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.2e-47 194.5 315 43.5
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 1.2e-47 194.5 306 42.8
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.5e-42 176.8 317 40.4
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 2.8e-41 173.3 331 40.5
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 8.1e-41 171.8 316 40.8
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 1.2e-39 167.9 344 39.0
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 3.4e-39 166.4 327 40.4
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 3.4e-39 166.4 312 37.8
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 7.5e-39 165.2 316 40.8
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 6.4e-38 162.2 310 37.7
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 1.1e-37 161.4 342 38.9
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.2e-37 158.3 330 40.9
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.6e-36 156.0 320 35.9
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 1.0e-35 154.8 334 35.6
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.3e-35 154.5 330 40.3
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 5.1e-35 152.5 340 35.6
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 1.9e-34 150.6 316 38.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.9e-34 150.6 321 38.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.6e-33 147.5 319 36.4
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.6e-33 147.5 330 40.0
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 2.1e-33 147.1 308 37.0
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 3.6e-33 146.4 313 39.6
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.6e-33 146.4 310 38.1
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 3.6e-33 146.4 330 37.9
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 6.2e-33 145.6 320 37.5
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 8.1e-33 145.2 319 36.4
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-32 144.4 306 36.6
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 3.1e-32 143.3 298 37.9
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 6.8e-32 142.1 307 36.8
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.5e-31 141.0 261 39.8
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.5e-31 141.0 318 38.1
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 2.0e-31 140.6 318 37.4
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 2.0e-31 140.6 316 36.7
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.6e-31 140.2 318 39.0
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 7.6e-31 138.7 316 35.8
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 6.4e-30 135.6 320 34.4
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 6.4e-30 135.6 315 36.8
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 6.4e-30 135.6 330 35.2
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.4e-29 134.4 321 33.3
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.9e-29 134.0 326 35.6
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 5.4e-29 132.5 320 34.1
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 5.4e-29 132.5 309 36.6
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.1e-28 130.6 306 34.3
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 4.6e-28 129.4 307 34.5
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 1.3e-27 127.9 312 35.9
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.3e-27 127.9 304 36.8
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 1.7e-27 127.5 312 37.8
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 2.3e-27 127.1 317 34.1
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 3.9e-27 126.3 324 34.9
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.9e-26 124.0 258 37.6
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 4.3e-26 122.9 323 32.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 4.3e-26 122.9 323 32.8
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 7.3e-26 122.1 314 35.4
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 2.1e-25 120.6 287 34.1
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 2.1e-25 120.6 256 37.5
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 3.6e-25 119.8 252 37.7
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 1.8e-24 117.5 332 35.2
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.2e-23 114.8 320 32.5
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 2.6e-23 113.6 312 34.0
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 7.6e-23 112.1 260 35.8
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.7e-22 110.9 304 34.5
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 2.2e-22 110.5 309 33.3
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.1e-21 108.2 256 36.3
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.4e-21 107.8 303 32.3
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 2.4e-21 107.1 309 33.3
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.6e-20 102.8 305 35.1
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 1.0e-19 101.7 338 31.7
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 1.0e-19 101.7 342 30.7
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.7e-19 100.9 302 31.8
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.3e-19 100.5 263 34.6
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 3.0e-19 100.1 304 31.9
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 5.1e-19 99.4 294 32.7
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.9e-18 97.4 246 33.3
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 3.3e-18 96.7 293 32.1
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.2e-15 88.2 300 30.0
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 2.9e-14 83.6 235 33.6
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.4e-13 80.5 243 33.3
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 2.4e-13 80.5 332 27.7
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 7.9e-12 75.5 311 28.6
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 3.3e-10 70.1 332 25.9
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 1.3e-09 68.2 167 35.3
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 8.1e-09 65.5 150 36.0
PGSC0003DMG400003786 Solanum tuberosum HOM05D038993 ORTHO05D009464 1.3e-06 58.2 29 89.7
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 2.9e-06 57.0 184 31.5


User provided reference genes

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