Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.4e-215 752.7 390 100.0
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.3e-211 739.6 387 98.2
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 4.2e-207 724.5 387 96.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 4.4e-188 661.4 387 87.3
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 8.2e-187 657.1 390 86.7
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.2e-184 649.0 376 88.0
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.6e-177 625.5 390 84.4
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.1e-138 497.3 358 70.1
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 1.9e-135 486.5 365 67.4
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.5e-135 484.2 373 67.0
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 9.2e-130 467.6 371 64.2
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.2e-129 467.2 307 74.9
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 6.6e-128 461.5 386 63.2
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 8.6e-128 461.1 313 71.6
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 8.6e-128 461.1 386 63.0
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.9e-127 459.9 374 63.1
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 3.3e-127 459.1 379 63.3
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 4.3e-127 458.8 369 64.8
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.6e-126 456.8 368 65.5
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 3.6e-126 455.7 307 72.6
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.4e-125 453.8 371 64.2
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 3.1e-125 452.6 379 62.8
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.5e-124 450.3 371 63.1
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.8e-124 448.4 319 70.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 7.6e-124 448.0 390 60.8
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 2.2e-123 446.4 375 61.6
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 2.2e-123 446.4 319 70.2
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 3.8e-123 445.7 375 61.9
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 8.4e-123 444.5 319 69.6
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.4e-122 443.7 326 69.3
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.4e-122 443.7 378 61.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 7.1e-122 441.4 315 70.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.6e-121 438.7 307 71.3
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.0e-120 437.6 316 66.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-120 437.6 336 67.3
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.0e-120 437.6 385 60.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.7e-120 436.8 377 57.3
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.3e-120 436.4 316 65.8
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 2.3e-120 436.4 317 67.2
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 3.9e-120 435.6 370 60.3
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 3.9e-120 435.6 313 68.4
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.1e-120 435.3 364 59.6
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 8.7e-120 434.5 302 69.9
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.9e-119 433.3 387 57.4
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.5e-119 433.0 317 65.3
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 3.3e-119 432.6 316 65.2
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 4.3e-119 432.2 321 68.2
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 5.6e-119 431.8 353 62.3
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 7.3e-119 431.4 316 64.9
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 7.3e-119 431.4 316 64.9
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 1.6e-118 430.3 380 59.7
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 2.8e-118 429.5 367 61.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 3.6e-118 429.1 376 58.0
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.8e-118 428.7 354 63.3
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.4e-117 427.2 438 54.3
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.4e-117 427.2 394 56.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.4e-117 427.2 312 66.7
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.8e-117 426.8 324 63.9
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.0e-117 425.6 301 70.8
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 1.5e-116 423.7 322 65.2
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.0e-116 423.3 324 65.7
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.6e-116 422.9 370 59.5
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.6e-116 422.9 359 61.0
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 4.4e-116 422.2 353 60.6
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 7.6e-116 421.4 367 59.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.3e-115 420.6 310 65.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.3e-115 420.6 310 65.8
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 1.3e-115 420.6 378 58.7
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 2.2e-115 419.9 343 63.6
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.8e-115 419.1 301 66.1
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.4e-114 417.2 357 59.1
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.9e-114 416.8 315 63.8
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 2.4e-114 416.4 343 63.0
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 2.4e-114 416.4 319 65.2
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 3.2e-114 416.0 308 67.5
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 7.1e-114 414.8 301 69.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 8.7e-112 407.9 297 65.3
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 5.6e-111 405.2 367 56.9
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.3e-110 404.1 334 62.9
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 1.2e-108 397.5 379 57.0
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.6e-108 396.4 322 62.1
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 4.9e-107 392.1 308 64.9
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 7.1e-106 388.3 286 67.5
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.6e-105 387.1 271 67.2
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 3.5e-105 386.0 323 60.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 4.6e-105 385.6 272 69.5
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 3.9e-104 382.5 314 58.0
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 1.3e-102 377.5 363 54.8
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 1.3e-102 377.5 339 58.7
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 3.1e-101 372.9 303 60.1
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.6e-100 369.8 295 65.1
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 3.8e-99 365.9 342 52.6
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.5e-98 363.2 294 61.9
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 7.1e-98 361.7 372 53.5
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.8e-96 357.1 327 59.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.6e-94 350.5 225 76.4
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.1e-93 347.8 277 62.8
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.9e-87 327.0 519 41.0
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.2e-86 323.6 301 52.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.0e-84 317.0 324 55.6
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.0e-80 304.7 359 43.7
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.1e-77 291.6 263 57.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 5.9e-76 288.9 303 47.2
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 2.5e-74 283.5 299 47.5
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 5.5e-74 282.3 311 44.1
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 2.5e-66 256.9 237 59.9
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 5.7e-63 245.7 189 63.5
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.9e-59 233.4 181 63.0
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.5e-55 221.1 153 71.2
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.4e-55 219.9 152 69.7
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.4e-45 187.2 235 47.2
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.6e-44 184.5 134 66.4
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 2.3e-43 180.6 162 56.8
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 8.9e-40 168.7 129 62.0
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 7.5e-39 165.6 164 53.0
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 9.5e-34 148.7 164 48.2
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 6.2e-33 146.0 164 47.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 3.1e-32 143.7 189 41.8
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 3.2e-29 133.7 112 59.8
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.7e-28 130.6 196 35.2
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.3e-26 123.6 89 70.8
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 4.4e-23 113.2 191 34.6
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 4.1e-21 106.7 124 49.2
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 4.3e-10 70.1 40 72.5
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 4.3e-10 70.1 40 72.5
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 1.2e-09 68.6 99 43.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 8.9e-08 62.4 31 80.6
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.3e-06 58.5 155 26.5
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 1.7e-06 58.2 128 29.7
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 6.4e-06 56.2 208 23.1


User provided reference genes

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