Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 3.6e-98 361.7 196 100.0
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 2.8e-82 308.9 174 98.3
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 1.4e-81 306.6 174 97.7
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 7.3e-67 257.7 179 83.8
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.9e-62 243.0 143 92.3
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 5.1e-60 235.0 179 76.5
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 9.9e-48 194.1 176 68.2
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 6.4e-39 164.9 172 58.1
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.2e-38 162.5 172 58.7
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.2e-37 160.6 172 58.1
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 3.1e-33 146.0 164 56.1
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 3.1e-33 146.0 239 46.4
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.5e-32 143.7 186 52.7
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 5.5e-30 135.2 202 47.5
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 2.7e-29 132.9 203 49.8
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.8e-28 130.2 175 48.0
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 2.3e-28 129.8 186 49.5
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 1.9e-27 126.7 175 52.0
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 1.6e-26 123.6 172 49.4
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 2.1e-26 123.2 96 68.8
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 6.2e-26 121.7 172 46.5
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 6.2e-26 121.7 106 69.8
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 8.2e-26 121.3 153 51.6
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 4.5e-24 115.5 172 49.4
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 7.6e-24 114.8 179 49.7
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 1.0e-23 114.4 172 44.8
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 1.7e-23 113.6 172 45.9
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 2.2e-23 113.2 175 44.0
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 2.2e-23 113.2 176 46.6
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 4.9e-23 112.1 171 45.0
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 6.5e-23 111.7 172 44.2
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 1.1e-22 110.9 164 50.0
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.1e-22 110.9 173 43.9
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 1.4e-22 110.5 155 47.1
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 1.9e-22 110.2 110 55.5
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 2.5e-22 109.8 106 56.6
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 2.5e-22 109.8 106 56.6
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.5e-22 109.8 106 56.6
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.5e-22 109.8 106 56.6
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 3.2e-22 109.4 149 49.7
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 3.2e-22 109.4 172 47.1
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 9.3e-22 107.8 173 46.8
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 9.3e-22 107.8 173 46.8
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 9.3e-22 107.8 98 61.2
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 9.3e-22 107.8 155 47.1
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.6e-21 107.1 160 43.1
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 2.1e-21 106.7 199 39.2
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 2.1e-21 106.7 155 46.5
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 2.7e-21 106.3 106 54.7
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 2.7e-21 106.3 166 43.4
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 3.5e-21 105.9 173 39.3
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 6.0e-21 105.1 188 43.6
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 6.0e-21 105.1 97 57.7
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 5.1e-20 102.1 90 60.0
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 6.7e-20 101.7 181 41.4
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.5e-19 100.5 156 43.6
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 1.9e-19 100.1 182 41.2
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.3e-19 99.4 113 53.1
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 5.7e-19 98.6 172 40.1
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.6e-18 97.1 153 43.8
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 1.6e-18 97.1 164 37.8
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.2e-18 96.7 160 41.2
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 2.2e-18 96.7 88 59.1
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 2.2e-18 96.7 88 59.1
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 2.2e-18 96.7 177 38.4
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.8e-18 96.3 153 43.8
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 8.2e-18 94.7 106 55.7
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 8.2e-18 94.7 158 44.3
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 2.4e-17 93.2 106 46.2
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 4.1e-17 92.4 118 50.0
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 6.9e-17 91.7 145 46.2
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 1.5e-16 90.5 148 40.5
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 2.0e-16 90.1 174 40.2
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.5e-16 89.0 117 49.6
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-15 87.4 202 40.6
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.7e-15 87.0 168 37.5
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 2.2e-15 86.7 166 33.7
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 5.0e-15 85.5 181 39.2
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 6.5e-15 85.1 173 39.9
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.6e-13 80.5 121 38.8
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 2.1e-13 80.1 172 37.2
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 3.6e-13 79.3 151 35.8
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 2.0e-11 73.6 198 30.8
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.7e-10 70.5 81 49.4
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.7e-10 70.5 81 49.4
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 2.2e-10 70.1 169 34.3
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.8e-09 67.0 45 75.6
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 4.1e-09 65.9 63 57.1
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.2e-08 64.3 68 54.4
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 1.2e-08 64.3 122 36.1
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.5e-08 63.9 173 35.8
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 2.0e-08 63.5 180 35.6
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 2.6e-08 63.2 173 31.8
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 4.5e-08 62.4 46 65.2
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 1.7e-07 60.5 163 36.2
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 8.5e-07 58.2 54 57.4
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 1.1e-06 57.8 45 62.2
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 5.5e-06 55.5 45 57.8


User provided reference genes

Program Settings