Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 2.4e-57 225.3 119 100.0
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 6.0e-56 220.7 119 96.6
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 6.9e-52 207.2 119 91.6
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 1.2e-48 196.4 119 87.4
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 2.8e-45 185.3 119 85.7
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 6.9e-36 154.1 96 75.0
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 2.5e-30 135.6 119 52.1
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 3.1e-28 128.6 125 56.8
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 2.9e-26 122.1 89 73.0
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 5.0e-26 121.3 98 67.3
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.1e-25 120.2 98 55.1
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 1.1e-25 120.2 130 48.5
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.4e-25 119.8 90 58.9
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 3.2e-25 118.6 91 70.3
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 5.5e-25 117.9 100 54.0
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 5.5e-25 117.9 83 65.1
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 2.7e-24 115.5 82 61.0
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 3.5e-24 115.2 118 50.0
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 4.6e-24 114.8 93 69.9
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 6.1e-24 114.4 107 49.5
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 7.9e-24 114.0 97 53.6
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 7.9e-24 114.0 89 70.8
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 7.9e-24 114.0 94 66.0
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 7.9e-24 114.0 117 59.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 7.9e-24 114.0 92 56.5
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 1.3e-23 113.2 77 76.6
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 1.3e-23 113.2 89 61.8
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 1.8e-23 112.8 99 53.5
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 1.8e-23 112.8 95 55.8
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.8e-23 112.8 78 59.0
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 3.0e-23 112.1 83 57.8
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 3.0e-23 112.1 94 69.1
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 5.1e-23 111.3 96 64.6
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 5.1e-23 111.3 96 64.6
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 5.1e-23 111.3 85 51.8
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 6.7e-23 110.9 81 69.1
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 6.7e-23 110.9 81 69.1
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 6.7e-23 110.9 103 62.1
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 6.7e-23 110.9 73 71.2
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 8.7e-23 110.5 101 51.5
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 8.7e-23 110.5 73 64.4
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 1.1e-22 110.2 103 50.5
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 1.5e-22 109.8 105 49.5
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 1.9e-22 109.4 91 57.1
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 1.9e-22 109.4 88 56.8
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 2.5e-22 109.0 74 62.2
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 2.5e-22 109.0 116 49.1
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.5e-22 109.0 80 75.0
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 3.3e-22 108.6 98 57.1
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 5.7e-22 107.8 80 55.0
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 9.7e-22 107.1 92 52.2
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 1.3e-21 106.7 89 66.3
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.2e-21 105.9 106 58.5
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 2.8e-21 105.5 72 61.1
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 6.3e-21 104.4 106 45.3
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 1.1e-20 103.6 79 54.4
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 1.4e-20 103.2 83 49.4
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 2.4e-20 102.4 105 58.1
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 3.1e-20 102.1 98 62.2
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 3.1e-20 102.1 99 60.6
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 2.0e-19 99.4 117 41.9
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 2.0e-19 99.4 68 63.2
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 4.5e-19 98.2 78 50.0
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 5.9e-19 97.8 93 61.3
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 1.0e-18 97.1 78 50.0
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 1.4e-17 93.2 55 69.1
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 1.9e-17 92.8 78 47.4
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.2e-16 90.1 58 62.1
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 1.6e-16 89.7 73 46.6
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 1.6e-16 89.7 57 63.2
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 7.9e-16 87.4 59 59.3
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 7.9e-16 87.4 72 51.4
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.8e-15 86.3 85 49.4
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 6.7e-15 84.3 79 64.6
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 6.7e-15 84.3 63 52.4
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 8.8e-15 84.0 59 55.9
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 2.5e-14 82.4 57 57.9
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 1.7e-13 79.7 123 42.3
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 1.8e-12 76.3 40 75.0
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 2.4e-12 75.9 107 36.4
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.5e-11 73.2 93 43.0
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 2.0e-11 72.8 77 40.3
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 2.6e-11 72.4 63 47.6
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.9e-09 66.2 37 62.2
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 1.9e-09 66.2 47 61.7
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 3.2e-09 65.5 34 82.4
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 7.2e-09 64.3 63 42.9
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 1.6e-08 63.2 30 73.3
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 2.7e-08 62.4 52 53.8


User provided reference genes

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