Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g068840.3 Solanum lycopersicum HOM05D011191 ORTHO05D010786 7.8e-118 427.2 219 100.0
Sopen08g022570 Solanum pennellii HOM05D011191 ORTHO05D010786 1.5e-113 412.9 220 97.7
PGSC0003DMG400014768 Solanum tuberosum HOM05D011191 ORTHO05D010786 2.0e-105 386.0 221 91.9
CAN.G273.25 Capsicum annuum HOM05D011191 ORTHO05D010786 8.4e-72 274.2 206 76.2
Nitab4.5_0012106g0010 Nicotiana tabacum HOM05D011191 ORTHO05D010786 6.7e-69 264.6 248 62.9
Nitab4.5_0000406g0150 Nicotiana tabacum HOM05D011191 ORTHO05D010786 1.3e-67 260.4 204 71.6
Peaxi162Scf01419g00119 Petunia axillaris HOM05D011191 ORTHO05D010786 4.2e-63 245.4 223 64.6
Peaxi162Scf00850g00110 Petunia axillaris HOM05D011191 ORTHO05D010786 4.0e-29 132.5 124 63.7
MSTRG.11791 Avicennia marina HOM05D011191 ORTHO05D010786 8.5e-16 88.2 147 42.2
SGA_v2.0_scaffold27G11628 Striga asiatica HOM05D011191 ORTHO05D010786 3.0e-13 79.7 159 39.0
Oeu064523.1 Olea europaea HOM05D011191 ORTHO05D010786 1.5e-12 77.4 186 34.4
Migut.A00390 Erythranthe guttata HOM05D011191 ORTHO05D010786 2.6e-12 76.6 188 31.4
FvH4_3g11660 Fragaria vesca HOM05D014033 ORTHO05D010786 4.4e-12 75.9 180 36.7
Cc08_g06710 Coffea canephora HOM05D011191 ORTHO05D010786 1.7e-11 73.9 88 48.9
FAN16G2119 Fragaria x ananassa HOM05D014033 ORTHO05D010786 2.2e-11 73.6 182 35.7
FAN21G1527 Fragaria x ananassa HOM05D014033 ORTHO05D010786 1.8e-10 70.5 185 35.1
RcHm_v2.0_Chr5g0018721 Rosa chinensis HOM05D014033 ORTHO05D010786 5.4e-10 68.9 155 36.1
Thecc.06G134400 Theobroma cacao HOM05D021816 ORTHO05D010786 5.4e-10 68.9 165 33.9
Potri.001G082800 Populus trichocarpa HOM05D011191 ORTHO05D010786 2.0e-09 67.0 155 36.8
SalBow4G0292 Salvia bowleyana HOM05D011191 ORTHO05D010786 2.0e-09 67.0 163 37.4
Carub.0007s2165 Capsella rubella HOM05D010419 ORTHO05D012558 5.9e-09 65.5 219 32.4
Gohir.A06G141400 Gossypium hirsutum HOM05D021816 ORTHO05D010786 1.0e-08 64.7 161 34.8
Hund20999 Selenicereus undatus HOM05D022334 ORTHO05D019466 8.6e-08 61.6 182 31.9
Sp7g18130 Schrenkiella parvula HOM05D010419 ORTHO05D012558 3.3e-07 59.7 210 31.0
CDE02G4627 Ceratophyllum demersum HOM05D002702 ORTHO05D010786 4.3e-07 59.3 189 30.2
THA.LOC104816256 Tarenaya hassleriana HOM05D002702 ORTHO05D003416 4.3e-07 59.3 197 30.5
Gohir.D06G146200 Gossypium hirsutum HOM05D021816 ORTHO05D010786 5.6e-07 58.9 157 33.1
Aa31LG6G2140 Aethionema arabicum HOM05D010419 ORTHO05D012558 7.3e-07 58.5 192 30.7
Duzib192G0687 Durio zibethinus HOM05D021816 ORTHO05D010786 9.5e-07 58.2 168 29.8
Manes.17G005100 Manihot esculenta HOM05D011191 ORTHO05D010786 9.5e-07 58.2 158 31.0
Gohir.D11G170800 Gossypium hirsutum HOM05D002702 ORTHO05D003416 1.6e-06 57.4 208 30.3
Gorai.007G182800 Gossypium raimondii HOM05D002702 ORTHO05D003416 1.6e-06 57.4 208 30.3
Nitab4.5_0000563g0080 Nicotiana tabacum HOM05D002702 ORTHO05D003416 1.6e-06 57.4 163 32.5
Nitab4.5_0002341g0020 Nicotiana tabacum HOM05D002702 ORTHO05D003416 1.6e-06 57.4 159 31.4
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 2.1e-06 57.0 129 34.9
FAN20G0954 Fragaria x ananassa HOM05D024095 ORTHO05D010786 2.1e-06 57.0 154 29.2
FAN27G3449 Fragaria x ananassa HOM05D024095 ORTHO05D010786 2.1e-06 57.0 157 31.2
THA.LOC104812896 Tarenaya hassleriana HOM05D010419 ORTHO05D012558 2.1e-06 57.0 214 29.4
COL.COLO4_30908 Corchorus olitorius HOM05D021816 ORTHO05D010786 2.8e-06 56.6 180 30.0
Sed0020965 Sechium edule HOM05D002702 ORTHO05D010786 2.8e-06 56.6 185 30.3
Gohir.A11G164500 Gossypium hirsutum HOM05D002702 ORTHO05D003416 3.6e-06 56.2 208 31.2
BcaB03g11630 Brassica carinata HOM05D010419 ORTHO05D012558 8.0e-06 55.1 95 43.2


User provided reference genes

Program Settings