Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 2.3e-151 538.9 275 100.0
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 1.5e-147 526.2 273 97.8
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 2.9e-138 495.4 303 85.5
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 2.0e-134 482.6 273 88.6
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 7.7e-131 470.7 272 87.1
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 1.0e-127 460.3 270 87.4
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.4e-102 375.6 215 89.3
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 1.8e-100 369.8 236 75.4
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 8.6e-98 360.9 260 68.8
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 2.1e-96 356.3 240 75.0
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 2.3e-95 352.8 257 68.1
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 5.2e-95 351.7 255 68.2
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.5e-94 350.1 267 67.0
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 2.0e-94 349.7 264 67.8
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 2.6e-94 349.4 239 72.0
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 5.8e-94 348.2 277 62.8
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 7.5e-94 347.8 246 69.1
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.3e-93 347.1 265 65.3
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 1.7e-93 346.7 249 69.1
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 2.2e-93 346.3 228 74.1
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 2.9e-93 345.9 239 72.8
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 3.7e-93 345.5 246 67.9
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 4.9e-93 345.1 234 71.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 1.1e-92 344.0 231 71.4
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 1.9e-92 343.2 246 66.7
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.9e-92 343.2 228 73.2
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 1.9e-92 343.2 259 65.6
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 3.2e-92 342.4 234 71.4
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 3.2e-92 342.4 262 65.6
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 4.1e-92 342.0 240 72.1
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 7.0e-92 341.3 257 65.8
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 9.2e-92 340.9 262 64.9
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 1.6e-91 340.1 264 65.2
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 2.7e-91 339.3 246 66.3
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 7.8e-91 337.8 255 66.7
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 1.0e-90 337.4 262 66.4
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 1.3e-90 337.0 228 69.7
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.3e-90 336.3 268 63.8
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 3.0e-90 335.9 227 72.2
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 3.9e-90 335.5 273 63.0
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 3.9e-90 335.5 222 72.1
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 5.0e-90 335.1 260 63.5
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 8.6e-90 334.3 251 66.5
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 1.5e-89 333.6 247 65.6
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.5e-89 333.6 243 70.4
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 1.5e-89 333.6 228 74.6
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 3.3e-89 332.4 267 64.0
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 4.3e-89 332.0 251 65.7
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.6e-89 331.6 264 64.0
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 7.3e-89 331.3 264 63.6
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 9.5e-89 330.9 264 64.4
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.6e-88 330.1 229 69.4
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 2.1e-88 329.7 261 65.1
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 2.8e-88 329.3 223 71.7
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 3.6e-88 328.9 243 67.1
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 4.7e-88 328.6 268 64.6
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 1.1e-87 327.4 232 67.7
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 1.8e-87 326.6 238 69.7
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 3.1e-87 325.9 234 69.2
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 8.9e-87 324.3 250 65.2
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 1.2e-86 323.9 245 68.2
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 1.5e-86 323.6 243 67.1
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 2.0e-86 323.2 257 63.8
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 2.0e-86 323.2 243 66.7
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 3.7e-85 318.9 236 64.4
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 6.4e-85 318.2 269 58.7
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 1.1e-84 317.4 217 72.8
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 3.2e-84 315.8 242 66.5
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 5.4e-84 315.1 234 69.7
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 1.0e-82 310.8 224 68.3
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 4.0e-79 298.9 236 66.5
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 5.2e-79 298.5 259 61.0
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 2.6e-78 296.2 238 61.8
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 2.6e-78 296.2 351 48.7
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 4.4e-78 295.4 224 63.8
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 1.7e-74 283.5 254 60.6
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 3.9e-74 282.3 224 62.9
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 1.5e-73 280.4 234 60.7
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 9.6e-73 277.7 236 61.9
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 1.1e-71 274.2 193 69.4
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 1.3e-69 267.3 217 64.5
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.7e-69 266.9 191 67.0
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 3.8e-69 265.8 182 70.9
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.1e-68 264.2 263 52.5
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 4.6e-67 258.8 269 52.4
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 2.5e-65 253.1 250 52.8
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 4.8e-64 248.8 240 53.8
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 7.6e-62 241.5 189 63.5
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 9.6e-57 224.6 212 56.6
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 1.6e-56 223.8 169 68.0
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 7.6e-54 214.9 233 47.6
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 4.9e-53 212.2 146 69.2
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.9e-52 210.3 180 60.6
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 4.2e-52 209.1 152 67.1
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 5.6e-49 198.7 349 38.4
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 1.6e-48 197.2 146 65.8
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 3.7e-48 196.1 153 62.7
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 6.9e-47 191.8 199 52.3
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 1.0e-34 151.4 181 49.2
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.7e-29 134.0 151 41.7
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 1.2e-27 127.9 236 35.6
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 6.1e-27 125.6 283 33.6
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 6.1e-27 125.6 96 64.6
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 1.1e-25 121.3 86 68.6
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.4e-18 97.8 60 76.7
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 1.5e-12 77.8 118 38.1
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.7e-09 65.9 35 85.7
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.7e-09 65.9 35 85.7
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 2.8e-08 63.5 35 82.9
PRCOL_00002778 Prasinoderma coloniale HOM05D007122 ORTHO05D008918 4.8e-08 62.8 238 30.3
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 7.0e-07 58.9 255 23.9
PSO210G7268 Papaver somniferum HOM05D002234 ORTHO05D002254 1.6e-06 57.8 233 24.5
FAN09G2218 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.9e-06 55.8 75 44.0
QL05p084699 Quercus lobata HOM05D007122 ORTHO05D008918 7.7e-06 55.5 53 50.9


User provided reference genes

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