Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g068470.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 3.5e-153 545.0 299 100.0
Solyc07g054570.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 7.0e-146 520.8 299 96.7
CAN.G996.14 Capsicum annuum HOM05D007183 ORTHO05D008829 2.1e-121 439.5 299 84.6
Nitab4.5_0001871g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 1.2e-116 423.7 300 80.3
Nitab4.5_0002370g0040 Nicotiana tabacum HOM05D007183 ORTHO05D008829 2.0e-108 396.4 300 69.7
Peaxi162Scf00007g00283 Petunia axillaris HOM05D007183 ORTHO05D008829 6.4e-107 391.3 299 69.6
Solyc10g008530.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 1.7e-86 323.6 301 54.2
PGSC0003DMG400042494 Solanum tuberosum HOM05D007183 ORTHO05D008829 2.4e-85 319.7 300 54.0
Dinv03840 Davidia involucrata HOM05D007183 ORTHO05D008829 4.5e-84 315.5 301 54.5
TAR629G0430 Trochodendron aralioides HOM05D007183 ORTHO05D008829 4.4e-79 298.9 304 52.0
Manes.13G149600 Manihot esculenta HOM05D007183 ORTHO05D008829 9.7e-79 297.7 302 52.3
GSVIVG01030561001 Vitis vinifera HOM05D007183 ORTHO05D008829 9.7e-79 297.7 300 51.7
Cc05_g06690 Coffea canephora HOM05D007183 ORTHO05D008829 7.0e-77 291.6 307 50.2
Manes.16G023400 Manihot esculenta HOM05D007183 ORTHO05D008829 9.1e-77 291.2 306 50.3
Potri.011G046100 Populus trichocarpa HOM05D007183 ORTHO05D008829 2.0e-76 290.0 303 50.5
Actinidia09880 Actinidia chinensis HOM05D007183 ORTHO05D008829 2.6e-76 289.7 301 61.1
TWI63G1715 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 7.2e-74 281.6 304 48.7
Ciclev10017704m.g Citrus clementina HOM05D007183 ORTHO05D008829 6.7e-72 275.0 302 46.7
PGR004G0270 Punica granatum HOM05D007183 ORTHO05D008829 1.1e-71 274.2 304 48.7
Thecc.06G194600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.1e-71 274.2 300 49.0
Potri.004G037400 Populus trichocarpa HOM05D007183 ORTHO05D008829 2.0e-71 273.5 303 48.5
Migut.H01046 Erythranthe guttata HOM05D007183 ORTHO05D008829 2.6e-71 273.1 297 59.9
Duzib235G0436 Durio zibethinus HOM05D007183 ORTHO05D008829 9.7e-71 271.2 304 58.6
TWI38G0385 Tripterygium wilfordii HOM05D007183 ORTHO05D008829 2.4e-69 266.5 307 47.9
Gorai.009G171300 Gossypium raimondii HOM05D007183 ORTHO05D008829 2.0e-68 263.5 306 55.9
Gohir.D05G166200 Gossypium hirsutum HOM05D007183 ORTHO05D008829 3.5e-68 262.7 306 56.2
Aqoxy1G02644 Aquilegia oxysepala HOM05D007183 ORTHO05D008829 4.5e-68 262.3 309 57.9
GSVIVG01006336001 Vitis vinifera HOM05D007183 ORTHO05D008829 3.8e-67 259.2 299 48.5
COL.COLO4_31536 Corchorus olitorius HOM05D007183 ORTHO05D008829 5.0e-67 258.8 300 55.7
Phvul.006G189500 Phaseolus vulgaris HOM05D007183 ORTHO05D008829 5.0e-67 258.8 305 46.2
Ca_00299_v3 Cicer arietinum L. HOM05D007183 ORTHO05D008829 8.5e-67 258.1 300 46.0
GSVIVG01006947001 Vitis vinifera HOM05D007183 ORTHO05D008829 1.5e-66 257.3 299 48.2
Thecc.02G174600 Theobroma cacao HOM05D007183 ORTHO05D008829 1.9e-66 256.9 302 48.7
Haze_13111 Corylus avellana HOM05D007183 ORTHO05D008829 2.5e-66 256.5 296 48.6
ATR0693G416 Amborella trichopoda HOM05D007183 ORTHO05D008829 3.2e-66 256.1 306 46.4
Glyma.13G243900 Glycine max HOM05D007183 ORTHO05D008829 4.2e-66 255.8 308 46.8
Medtr2g012790 Medicago truncatula HOM05D007183 ORTHO05D008829 4.2e-66 255.8 300 46.0
Lj6g0020427 Lotus japonicus HOM05D007183 ORTHO05D008829 5.5e-66 255.4 303 46.2
Eucgr.E03363 Eucalyptus grandis HOM05D007183 ORTHO05D008829 7.2e-66 255.0 298 57.0
MBI02_g37921_MAGBIO Magnolia biondii HOM05D007183 ORTHO05D008829 1.6e-65 253.8 295 54.2
HanXRQChr05g0140521 Helianthus annuus HOM05D007183 ORTHO05D008829 1.0e-64 251.1 301 44.5
Psat1g207000 Pisum sativum HOM05D007183 ORTHO05D008829 2.3e-64 250.0 300 45.0
VMungo0540G0277 Vigna mungo HOM05D007183 ORTHO05D008829 3.0e-64 249.6 305 45.6
Cpa.g.sc34.121 Carica papaya HOM05D007183 ORTHO05D008829 5.2e-64 248.8 265 49.4
RcHm_v2.0_Chr5g0007471 Rosa chinensis HOM05D007183 ORTHO05D008829 5.2e-64 248.8 305 45.2
Gohir.A10G022800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 6.7e-64 248.4 300 44.7
Nitab4.5_0007319g0020 Nicotiana tabacum HOM05D007183 ORTHO05D008829 6.7e-64 248.4 301 44.5
PGR042G2243 Punica granatum HOM05D007183 ORTHO05D008829 8.8e-64 248.1 306 46.7
FvH4_3g27971 Fragaria vesca HOM05D007183 ORTHO05D008829 1.2e-63 247.7 305 44.9
Gorai.005G204400 Gossypium raimondii HOM05D007183 ORTHO05D008829 1.2e-63 247.7 297 47.8
Gohir.D10G023600 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.0e-63 246.9 300 45.0
Gorai.011G024700 Gossypium raimondii HOM05D007183 ORTHO05D008829 2.0e-63 246.9 303 45.5
Eucgr.D00687 Eucalyptus grandis HOM05D007183 ORTHO05D008829 3.3e-63 246.1 326 52.5
Gohir.D02G181900 Gossypium hirsutum HOM05D007183 ORTHO05D008829 7.5e-63 245.0 297 47.5
MD05G1322500 Malus domestica HOM05D007183 ORTHO05D008829 9.7e-63 244.6 303 45.2
TPR.G36730 Trifolium pratense HOM05D007183 ORTHO05D008829 9.7e-63 244.6 309 44.3
CANSAT35G0251 Cannabis sativa HOM05D007183 ORTHO05D008829 1.7e-62 243.8 300 42.7
ClCG02G001190 Citrullus lanatus HOM05D007183 ORTHO05D008829 2.8e-62 243.0 295 47.5
Gohir.A05G163250 Gossypium hirsutum HOM05D007183 ORTHO05D008829 2.8e-62 243.0 305 44.3
MD10G1300400 Malus domestica HOM05D007183 ORTHO05D008829 6.3e-62 241.9 304 44.7
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea HOM05D007183 ORTHO05D008829 1.1e-61 241.1 301 44.2
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea HOM05D007183 ORTHO05D008829 3.1e-61 239.6 301 44.2
COL.COLO4_35412 Corchorus olitorius HOM05D007183 ORTHO05D008829 7.0e-61 238.4 299 46.2
Lj2P283T62 Lonicera japonica HOM05D007183 ORTHO05D008829 1.6e-60 237.3 261 47.9
Glyma.15G069800 Glycine max HOM05D007183 ORTHO05D008829 2.0e-60 236.9 268 48.1
MELO3C018752.2 Cucumis melo HOM05D007183 ORTHO05D008829 3.5e-60 236.1 297 46.1
Prupe.4G040300 Prunus persica HOM05D007183 ORTHO05D008829 3.5e-60 236.1 307 44.3
CsaV3_7G004260 Cucumis sativus L. HOM05D007183 ORTHO05D008829 4.5e-60 235.7 297 46.1
PSO675G2267 Papaver somniferum HOM05D007183 ORTHO05D008829 1.7e-59 233.8 303 44.2
Sed0026806 Sechium edule HOM05D007183 ORTHO05D008829 3.8e-59 232.6 300 47.3
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea HOM05D007183 ORTHO05D008829 8.5e-59 231.5 303 43.6
HanXRQChr16g0517841 Helianthus annuus HOM05D007183 ORTHO05D008829 8.5e-59 231.5 306 42.2
Sed0021459 Sechium edule HOM05D007183 ORTHO05D008829 1.9e-58 230.3 297 46.5
PGSC0003DMG400045796 Solanum tuberosum HOM05D007183 ORTHO05D008829 2.5e-58 229.9 304 42.8
Nitab4.5_0001820g0090 Nicotiana tabacum HOM05D007183 ORTHO05D008829 9.4e-58 228.0 303 43.2
Oeu038241.1 Olea europaea HOM05D007183 ORTHO05D008829 2.1e-57 226.9 297 55.6
Eucgr.L02005 Eucalyptus grandis HOM05D007183 ORTHO05D008829 1.0e-56 224.6 301 43.9
TPR.G36795 Trifolium pratense HOM05D007183 ORTHO05D008829 1.4e-56 224.2 299 42.5
ECA234G1429 Erigeron canadensis HOM05D007183 ORTHO05D000476 8.8e-56 221.5 296 42.2
PSO541G4014 Papaver somniferum HOM05D007183 ORTHO05D008829 8.8e-56 221.5 303 42.2
Sopen02g023560 Solanum pennellii HOM05D007183 ORTHO05D008829 7.5e-55 218.4 304 41.4
Migut.M01164 Erythranthe guttata HOM05D007183 ORTHO05D008829 3.7e-54 216.1 298 53.4
Haze_06540 Corylus avellana HOM05D007183 ORTHO05D008829 2.7e-52 209.9 302 41.7
SEGI_07341 Sequoiadendron giganteum HOM05D007183 ORTHO05D008829 2.7e-52 209.9 307 48.2
Solyc02g078710.1 Solanum lycopersicum HOM05D007183 ORTHO05D008829 3.5e-52 209.5 304 40.5
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla HOM05D007183 ORTHO05D008829 1.0e-51 208.0 302 42.7
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea HOM05D007183 ORTHO05D008829 6.6e-51 205.3 288 42.0
Actinidia39436 Actinidia chinensis HOM05D007183 ORTHO05D008829 1.1e-50 204.5 298 52.7
DCAR_021231 Daucus carota HOM05D007183 ORTHO05D008829 9.5e-50 201.4 160 57.5
Dinv40521 Davidia involucrata HOM05D007183 ORTHO05D008829 2.1e-49 200.3 151 64.2
CAN.G168.28 Capsicum annuum HOM05D007183 ORTHO05D008829 2.8e-49 199.9 207 51.7
Cfa000386 Carpinus fangiana HOM05D007183 ORTHO05D008829 2.3e-48 196.8 294 41.2
Gohir.A03G158800 Gossypium hirsutum HOM05D007183 ORTHO05D008829 8.9e-48 194.9 253 44.7
Peaxi162Scf00608g00919 Petunia axillaris HOM05D007183 ORTHO05D008829 1.1e-42 177.9 171 53.8
Zm00001eb258250 Zea mays HOM05D007183 ORTHO05D008829 4.0e-40 169.5 313 38.3
CiPaw.09G053400 Carya illinoinensis HOM05D007183 ORTHO05D008829 5.8e-39 165.6 292 38.7
AagrBONN_evm.TU.Sc2ySwM_117.2587 Anthoceros agrestis HOM05D006800 ORTHO05D008478 5.4e-37 159.1 247 34.0
AagrBONN_evm.TU.Sc2ySwM_117.3060 Anthoceros agrestis HOM05D007183 ORTHO05D008829 2.3e-35 153.7 302 43.0
Cc00_g11490 Coffea canephora HOM05D007183 ORTHO05D008829 5.0e-35 152.5 267 35.6
Actinidia01436 Actinidia chinensis HOM05D007183 ORTHO05D008829 9.8e-31 138.3 117 57.3
Lj8A115T58 Lonicera japonica HOM05D007183 ORTHO05D008829 2.2e-30 137.1 110 60.0
Peaxi162Scf00812g00041 Petunia axillaris HOM05D007183 ORTHO05D008829 2.1e-28 130.6 158 43.7
SMO358G0266 Selaginella moellendorffii HOM05D007183 ORTHO05D008829 2.5e-26 123.6 305 30.5
Eucgr.D00692 Eucalyptus grandis HOM05D007183 ORTHO05D008829 5.8e-23 112.5 289 28.7
Sabra19G0114400 Salix brachista HOM05D007183 ORTHO05D008829 1.6e-12 77.8 132 38.6
Oeu058749.1 Olea europaea HOM05D007183 ORTHO05D008829 5.6e-10 69.3 62 51.6
PGR004G1039 Punica granatum HOM05D000667 ORTHO05D003095 4.0e-08 63.2 257 24.9
Os02g0805400 Oryza sativa ssp. japonica HOM05D007183 ORTHO05D008829 5.3e-08 62.8 80 47.5
Zm00001eb426430 Zea mays HOM05D007183 ORTHO05D008829 2.6e-07 60.5 72 44.4
Aqoxy5G02870 Aquilegia oxysepala HOM05D000667 ORTHO05D003095 3.4e-07 60.1 253 24.1
CiPaw.01G126800 Carya illinoinensis HOM05D000667 ORTHO05D003095 2.9e-06 57.0 288 24.0
SMO343G0007 Selaginella moellendorffii HOM05D000667 ORTHO05D008829 3.8e-06 56.6 92 35.9


User provided reference genes

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