Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g068460.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.2e-120 436.8 258 100.0
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 1.3e-95 353.6 288 80.2
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 2.3e-92 342.8 288 76.0
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 2.6e-88 329.3 288 75.7
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.8e-65 253.4 296 62.2
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 3.2e-62 242.7 261 63.2
Solyc01g106180.3 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.4e-49 200.7 128 86.7
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 7.9e-45 184.9 268 52.6
Sopen12g021050 Solanum pennellii HOM05D009304 ORTHO05D003109 2.4e-41 173.3 128 78.1
Solyc08g045770.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.3e-39 167.5 99 91.9
Solyc11g043180.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 2.9e-39 166.4 99 90.9
Solyc04g007740.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 3.8e-39 166.0 99 90.9
CAN.G996.13 Capsicum annuum HOM05D009304 ORTHO05D003109 6.7e-36 155.2 294 52.7
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 1.0e-23 114.8 276 40.2
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 8.5e-23 111.7 295 38.6
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 7.5e-19 98.6 262 38.9
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 4.8e-18 95.9 263 39.2
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 1.4e-17 94.4 273 37.7
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 3.1e-17 93.2 254 39.0
Actinidia09882 Actinidia chinensis HOM05D009304 ORTHO05D003109 1.6e-13 80.9 252 35.7
Hma1.2p1_0280F.1_g112760 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 5.2e-12 75.9 178 43.3
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 2.6e-11 73.6 258 34.9
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 3.4e-11 73.2 263 33.8
Dinv01395 Davidia involucrata HOM05D009304 ORTHO05D003109 1.4e-09 67.8 252 34.1
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.4e-09 67.8 280 34.3
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 3.1e-09 66.6 244 34.4
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 7.0e-09 65.5 280 33.6
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 9.1e-09 65.1 278 38.1
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.2e-08 64.7 286 34.3
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 2.0e-08 63.9 290 33.4
Solyc09g082960.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 2.0e-08 63.9 51 72.5
Migut.H01045 Erythranthe guttata HOM05D009304 ORTHO05D026975 2.7e-08 63.5 264 31.8
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 3.5e-08 63.2 290 31.7
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 5.9e-08 62.4 281 38.1
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 7.7e-08 62.0 275 32.7
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.0e-07 61.6 316 32.3
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.0e-07 61.6 274 32.5
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.0e-07 61.6 302 30.8
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 1.0e-07 61.6 289 33.6
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 1.3e-07 61.2 290 31.0
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.7e-07 60.8 247 35.6
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 2.9e-07 60.1 282 32.3
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 5.0e-07 59.3 282 35.5
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 6.5e-07 58.9 276 32.6
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 6.5e-07 58.9 260 36.5
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 1.5e-06 57.8 305 30.2
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.5e-06 57.8 301 29.2
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.5e-06 57.8 274 35.0
ClCG00G003130 Citrullus lanatus HOM05D004441 ORTHO05D003109 2.5e-06 57.0 278 32.7
ClCG01G022730 Citrullus lanatus HOM05D004441 ORTHO05D003109 2.5e-06 57.0 278 32.7
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 2.5e-06 57.0 260 33.5
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.5e-06 57.0 246 37.0
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.5e-06 57.0 246 37.0
CsaV3_6G049880 Cucumis sativus L. HOM05D004441 ORTHO05D003109 3.2e-06 56.6 281 31.0
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 4.2e-06 56.2 299 29.8
Thhalv10023654m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 4.2e-06 56.2 168 36.9
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 5.5e-06 55.8 308 28.9
Lalb_Chr20g0122111 Lupinus albus HOM05D004441 ORTHO05D003109 5.5e-06 55.8 271 35.8
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 7.2e-06 55.5 300 28.7
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 9.4e-06 55.1 296 31.8


User provided reference genes

Program Settings