Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067980.3 Solanum lycopersicum HOM05D007649 ORTHO05D009668 2.0e-53 212.2 112 100.0
Sopen08g021900 Solanum pennellii HOM05D007649 ORTHO05D009668 1.3e-36 156.4 106 84.9
Nitab4.5_0012591g0010 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.5e-29 132.9 106 72.6
Nitab4.5_0000250g0070 Nicotiana tabacum HOM05D007649 ORTHO05D009668 1.0e-28 130.2 106 71.7
Peaxi162Scf00105g01010 Petunia axillaris HOM05D007649 ORTHO05D009668 2.5e-27 125.6 108 72.2
CAN.G1384.1 Capsicum annuum HOM05D007649 ORTHO05D009668 1.4e-25 119.8 106 69.8
Dinv30235 Davidia involucrata HOM05D007649 ORTHO05D009668 3.2e-19 98.6 97 55.7
PGSC0003DMG400014488 Solanum tuberosum HOM05D007649 ORTHO05D009668 3.2e-19 98.6 53 96.2
CiPaw.08G016800 Carya illinoinensis HOM05D007649 ORTHO05D009668 6.1e-18 94.4 97 53.6
GSVIVG01035747001 Vitis vinifera HOM05D007649 ORTHO05D009668 6.1e-18 94.4 88 58.0
QL12p031020 Quercus lobata HOM05D007649 ORTHO05D009668 1.8e-17 92.8 104 51.0
HanXRQChr10g0313021 Helianthus annuus HOM05D007649 ORTHO05D009668 2.0e-16 89.4 94 55.3
AUR62024825 Chenopodium quinoa HOM05D007649 ORTHO05D009668 4.4e-16 88.2 88 54.5
PGR044G0128 Punica granatum HOM05D007649 ORTHO05D009668 5.7e-16 87.8 96 51.0
Actinidia13297 Actinidia chinensis HOM05D007649 ORTHO05D009668 7.5e-16 87.4 104 48.1
AUR62032390 Chenopodium quinoa HOM05D007649 ORTHO05D009668 1.3e-15 86.7 88 53.4
Lsat_1_v5_gn_6_8481 Lactuca sativa HOM05D007649 ORTHO05D009668 1.3e-15 86.7 94 54.3
Oeu033993.1 Olea europaea HOM05D007649 ORTHO05D009668 1.3e-15 86.7 63 68.3
Oeu033995.1 Olea europaea HOM05D007649 ORTHO05D009668 1.3e-15 86.7 63 68.3
Prupe.1G464700 Prunus persica HOM05D007649 ORTHO05D009668 1.3e-15 86.7 109 45.9
Eucgr.C02878 Eucalyptus grandis HOM05D007649 ORTHO05D009668 1.7e-15 86.3 63 68.3
EL10Ac2g02528 Beta vulgaris HOM05D007649 ORTHO05D009668 2.8e-15 85.5 106 49.1
Nn2g11782 Nelumbo nucifera HOM05D007649 ORTHO05D009668 2.8e-15 85.5 88 53.4
Gohir.D07G028200 Gossypium hirsutum HOM05D007649 ORTHO05D009668 3.7e-15 85.1 62 69.4
Gorai.001G029500 Gossypium raimondii HOM05D007649 ORTHO05D009668 3.7e-15 85.1 62 69.4
Rhsim07G0149600 Rhododendron simsii HOM05D007649 ORTHO05D009668 4.8e-15 84.7 63 65.1
Cc08_g08160 Coffea canephora HOM05D007649 ORTHO05D009668 6.3e-15 84.3 89 47.2
Haze_21646 Corylus avellana HOM05D007649 ORTHO05D009668 6.3e-15 84.3 98 50.0
Aqoxy7G01751 Aquilegia oxysepala HOM05D007649 ORTHO05D009668 8.2e-15 84.0 90 54.4
CANSAT25G0191 Cannabis sativa HOM05D007649 ORTHO05D009668 8.2e-15 84.0 94 48.9
ECA233G5733 Erigeron canadensis HOM05D007649 ORTHO05D009668 1.4e-14 83.2 89 51.7
Manes.16G069200 Manihot esculenta HOM05D007649 ORTHO05D009668 1.4e-14 83.2 93 53.8
TAR383G0510 Trochodendron aralioides HOM05D007649 ORTHO05D009668 1.4e-14 83.2 105 44.8
MBI04_g10458_MAGBIO Magnolia biondii HOM05D007649 ORTHO05D009668 1.8e-14 82.8 62 64.5
Atru.chr7.2308 Acer truncatum HOM05D007649 ORTHO05D009668 2.4e-14 82.4 88 53.4
Hund02998 Selenicereus undatus HOM05D007649 ORTHO05D009668 2.4e-14 82.4 62 64.5
Sc09g0008910 Simmondsia chinensis HOM05D007649 ORTHO05D009668 3.1e-14 82.0 92 51.1
Duzib150G1676 Durio zibethinus HOM05D007649 ORTHO05D009668 1.2e-13 80.1 89 50.6
Ah.12g060320 Amaranthus hybridus HOM05D007649 ORTHO05D009668 1.6e-13 79.7 98 46.9
Cpa.g.sc205.32 Carica papaya HOM05D007649 ORTHO05D009668 1.6e-13 79.7 93 49.5
ClCG05G017300 Citrullus lanatus HOM05D007649 ORTHO05D009668 1.6e-13 79.7 88 47.7
CsaV3_3G046810 Cucumis sativus L. HOM05D007649 ORTHO05D009668 2.0e-13 79.3 88 47.7
CSS0042406 Camellia sinensis var. sinensis HOM05D007649 ORTHO05D009668 2.7e-13 79.0 64 60.9
MELO3C003657.2 Cucumis melo HOM05D007649 ORTHO05D009668 2.7e-13 79.0 88 47.7
FvH4_7g03290 Fragaria vesca HOM05D007649 ORTHO05D009668 2.7e-13 79.0 93 47.3
THA.LOC104799213 Tarenaya hassleriana HOM05D007649 ORTHO05D009668 2.7e-13 79.0 108 44.4
Psat5g025760 Pisum sativum HOM05D007649 ORTHO05D009668 3.5e-13 78.6 88 46.6
Glyma.06G074500 Glycine max HOM05D007649 ORTHO05D009668 4.5e-13 78.2 98 43.9
Lj1g0000027 Lotus japonicus HOM05D007649 ORTHO05D009668 7.7e-13 77.4 98 44.9
MD08G1134800 Malus domestica HOM05D007649 ORTHO05D009668 1.3e-12 76.6 104 42.3
arahy.Tifrunner.gnm1.ann1.0NF80D Arachis hypogaea HOM05D007649 ORTHO05D009668 1.7e-12 76.3 88 46.6
arahy.Tifrunner.gnm1.ann1.3N1A5Y Arachis hypogaea HOM05D007649 ORTHO05D009668 1.7e-12 76.3 88 46.6
FAN10G0583 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.7e-12 76.3 103 42.7
Sp2g21960 Schrenkiella parvula HOM05D007649 ORTHO05D009668 1.7e-12 76.3 62 58.1
Carub.0006s2344 Capsella rubella HOM05D007649 ORTHO05D009668 2.2e-12 75.9 62 61.3
Migut.N01074 Erythranthe guttata HOM05D007649 ORTHO05D009668 2.9e-12 75.5 89 46.1
BolC7t44754H Brassica oleracea HOM05D007649 ORTHO05D009668 3.8e-12 75.1 63 57.1
CARHR187800 Cardamine hirsuta HOM05D007649 ORTHO05D009668 3.8e-12 75.1 62 59.7
Glyma.04G073400 Glycine max HOM05D007649 ORTHO05D009668 3.8e-12 75.1 98 42.9
A06p36270 Brassica napus HOM05D007649 ORTHO05D009668 5.0e-12 74.7 62 58.1
BraA06t26549Z Brassica rapa HOM05D007649 ORTHO05D009668 5.0e-12 74.7 62 58.1
CDE05G1266 Ceratophyllum demersum HOM05D007649 ORTHO05D009668 5.0e-12 74.7 100 45.0
Thhalv10005188m.g Eutrema salsugineum HOM05D007649 ORTHO05D009668 5.0e-12 74.7 62 58.1
Medtr3g108310 Medicago truncatula HOM05D007649 ORTHO05D009668 5.0e-12 74.7 103 41.7
AL6G37400 Arabidopsis lyrata HOM05D007649 ORTHO05D009668 6.5e-12 74.3 62 58.1
Potri.006G245100 Populus trichocarpa HOM05D007649 ORTHO05D009668 6.5e-12 74.3 89 49.4
PSO063G4106 Papaver somniferum HOM05D007649 ORTHO05D009668 8.5e-12 73.9 87 49.4
Duzib168G0100 Durio zibethinus HOM05D007649 ORTHO05D009668 1.1e-11 73.6 89 48.3
RcHm_v2.0_Chr1g0325561 Rosa chinensis HOM05D007649 ORTHO05D009668 1.1e-11 73.6 94 42.6
Sed0022915 Sechium edule HOM05D007649 ORTHO05D009668 1.1e-11 73.6 62 54.8
TWI63G0355 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 1.9e-11 72.8 100 39.0
TPR.G12493 Trifolium pratense HOM05D007649 ORTHO05D009668 2.5e-11 72.4 88 44.3
BolC2t12006H Brassica oleracea HOM05D007649 ORTHO05D009668 4.2e-11 71.6 104 39.4
AT5G25570 Arabidopsis thaliana HOM05D007649 ORTHO05D009668 5.5e-11 71.2 62 56.5
Aa31LG11G4690 Aethionema arabicum HOM05D007649 ORTHO05D009668 7.2e-11 70.9 62 58.1
Sabra06G0191900 Salix brachista HOM05D007649 ORTHO05D009668 7.2e-11 70.9 63 55.6
C02p59430 Brassica napus HOM05D007649 ORTHO05D009668 1.2e-10 70.1 62 54.8
Ciclev10010030m.g Citrus clementina HOM05D007649 ORTHO05D009668 1.2e-10 70.1 91 46.2
Potri.012G125000 Populus trichocarpa HOM05D007649 ORTHO05D009668 1.2e-10 70.1 89 48.3
Sed0003009 Sechium edule HOM05D007649 ORTHO05D009668 1.6e-10 69.7 62 53.2
ATR0037G059 Amborella trichopoda HOM05D007649 ORTHO05D009668 2.1e-10 69.3 70 51.4
SalBow4G3148 Salvia bowleyana HOM05D007649 ORTHO05D009668 8.0e-10 67.4 86 43.0
Phvul.009G099200 Phaseolus vulgaris HOM05D007649 ORTHO05D009668 1.8e-09 66.2 98 37.8
FAN06G3614 Fragaria x ananassa HOM05D007649 ORTHO05D009668 8.8e-09 63.9 53 56.6
TWI34G1739 Tripterygium wilfordii HOM05D007649 ORTHO05D009668 2.0e-08 62.8 51 60.8
vmacro05350 Vaccinium macrocarpon HOM05D007649 ORTHO05D009668 2.2e-07 59.3 47 55.3
Os05g0180700 Oryza sativa ssp. japonica HOM05D007649 ORTHO05D009668 1.4e-06 56.6 67 40.3
FAN03G3370 Fragaria x ananassa HOM05D007649 ORTHO05D009668 1.8e-06 56.2 93 38.7
Actinidia14648 Actinidia chinensis HOM05D007649 ORTHO05D009668 4.1e-06 55.1 68 47.1


User provided reference genes

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