Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.7e-54 215.7 104 100.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.9e-54 214.9 104 99.0
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.4e-48 196.1 102 91.2
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.5e-44 181.4 101 86.1
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.0e-43 179.9 101 85.1
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.8e-41 171.8 101 74.3
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.8e-40 169.1 99 73.7
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 4.0e-40 167.9 101 76.2
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 4.0e-40 167.9 104 72.1
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 6.9e-40 167.2 101 73.3
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 2.0e-39 165.6 101 72.3
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.6e-39 165.2 100 72.0
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.6e-39 165.2 100 72.0
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 4.5e-39 164.5 104 72.1
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 4.5e-39 164.5 101 72.3
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 5.8e-39 164.1 101 74.3
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 7.6e-39 163.7 103 70.9
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 7.6e-39 163.7 104 71.2
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 9.9e-39 163.3 104 70.2
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.3e-38 162.9 101 73.3
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.3e-38 162.9 101 73.3
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 1.3e-38 162.9 103 72.8
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.7e-38 162.5 102 69.6
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 2.2e-38 162.2 101 72.3
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 2.2e-38 162.2 103 74.8
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.9e-38 161.8 103 71.8
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.9e-38 161.8 101 69.3
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.9e-38 161.8 101 72.3
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 3.8e-38 161.4 105 72.4
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 3.8e-38 161.4 101 73.3
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 4.9e-38 161.0 106 68.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 4.9e-38 161.0 100 72.0
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 4.9e-38 161.0 93 77.4
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 6.4e-38 160.6 103 72.8
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 6.4e-38 160.6 103 72.8
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 6.4e-38 160.6 100 71.0
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 6.4e-38 160.6 101 73.3
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 6.4e-38 160.6 103 70.9
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 8.4e-38 160.2 103 71.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 8.4e-38 160.2 107 71.0
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 8.4e-38 160.2 101 70.3
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.1e-37 159.8 101 72.3
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.1e-37 159.8 103 69.9
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.4e-37 159.5 99 69.7
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.9e-37 159.1 101 66.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.4e-37 158.7 106 70.8
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.2e-37 158.3 103 71.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 3.2e-37 158.3 101 65.3
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 4.2e-37 157.9 103 71.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 4.2e-37 157.9 102 68.6
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 4.2e-37 157.9 102 73.5
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 4.2e-37 157.9 102 64.7
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.4e-37 157.5 102 68.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 9.3e-37 156.8 106 71.7
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 9.3e-37 156.8 100 70.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.2e-36 156.4 97 73.2
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.6e-36 156.0 100 70.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.1e-36 155.6 102 66.7
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.1e-36 155.6 97 75.3
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 6.0e-36 154.1 105 66.7
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 7.9e-36 153.7 90 74.4
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 7.9e-36 153.7 90 74.4
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 7.9e-36 153.7 90 74.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 7.9e-36 153.7 102 65.7
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.0e-35 153.3 103 68.9
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.0e-35 153.3 100 67.0
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.3e-35 152.9 114 59.6
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.3e-35 152.9 103 65.0
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.8e-35 152.5 102 70.6
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.0e-35 151.8 93 74.2
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.9e-35 151.4 107 64.5
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 3.9e-35 151.4 98 72.4
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 3.9e-35 151.4 100 70.0
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 5.1e-35 151.0 99 66.7
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 6.7e-35 150.6 110 69.1
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 8.7e-35 150.2 100 68.0
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.1e-34 149.8 104 70.2
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.1e-34 149.8 103 65.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.5e-34 149.4 103 66.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.5e-34 148.7 107 64.5
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.6e-33 146.0 103 66.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.1e-33 145.6 100 64.0
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.8e-33 145.2 99 66.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 4.8e-33 144.4 111 60.4
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 4.8e-33 144.4 101 64.4
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-32 143.3 100 62.0
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.4e-32 142.9 101 63.4
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.8e-32 142.5 97 67.0
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.1e-32 141.7 107 60.7
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 4.0e-32 141.4 107 60.7
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 9.0e-32 140.2 91 68.1
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 2.0e-31 139.0 101 62.4
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.6e-31 138.7 101 61.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.3e-30 136.3 101 61.4
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.3e-30 136.3 101 61.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.8e-30 134.8 137 49.6
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 4.9e-30 134.4 101 61.4
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 3.2e-29 131.7 77 79.2
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 6.0e-28 127.5 77 75.3
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 3.9e-27 124.8 79 72.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 9.6e-26 120.2 66 84.8
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.3e-25 119.8 68 76.5
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.3e-25 119.8 68 79.4
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.6e-25 119.4 78 70.5
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 6.2e-25 117.5 98 56.1
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.2e-23 113.2 80 70.0
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 8.4e-22 107.1 64 75.0
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 5.5e-21 104.4 110 47.3
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 9.3e-21 103.6 63 74.6
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 2.7e-20 102.1 85 60.0
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.3e-19 99.8 95 49.5
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 2.2e-17 92.4 109 41.3
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.5e-15 86.3 59 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 2.6e-15 85.5 83 48.2
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 7.2e-13 77.4 90 46.7
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 9.4e-13 77.0 50 68.0
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 6.1e-12 74.3 59 54.2
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-11 73.2 61 57.4


User provided reference genes

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