Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.1e-141 506.5 250 100.0
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.4e-69 265.8 240 60.8
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.8e-44 182.6 151 66.2
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.0e-33 146.4 101 76.2
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 8.0e-26 121.7 239 34.3
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 1.5e-24 117.5 240 32.1
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 7.5e-24 115.2 223 36.8
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 9.7e-24 114.8 235 32.3
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 3.7e-23 112.8 245 32.7
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 1.1e-22 111.3 231 32.5
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 9.1e-22 108.2 237 32.9
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 8.5e-20 101.7 96 54.2
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.5e-19 100.1 218 33.9
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 7.2e-19 98.6 223 33.6
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 1.4e-17 94.4 132 38.6
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 7.5e-16 88.6 221 31.7
MD15G1112200 Malus domestica HOM05D010238 ORTHO05D010031 1.1e-14 84.7 111 40.5
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 2.4e-14 83.6 100 46.0
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 7.0e-14 82.0 216 30.1
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 5.0e-12 75.9 222 27.5
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 6.5e-12 75.5 80 48.8
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 1.9e-11 73.9 222 27.9
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 2.5e-11 73.6 204 28.4
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 2.5e-11 73.6 222 27.9
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 9.5e-11 71.6 216 28.7
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 1.2e-10 71.2 221 27.1
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 1.2e-10 71.2 221 27.1
Rhsim02G0192000 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.6e-10 70.9 230 27.8
TPR.G15657 Trifolium pratense HOM05D000890 ORTHO05D000697 2.1e-10 70.5 86 43.0
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 2.8e-10 70.1 197 27.9
QL02p008501 Quercus lobata HOM05D020907 ORTHO05D010031 4.7e-10 69.3 91 42.9
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.0e-09 68.2 97 41.2
Peaxi162Scf00251g00014 Petunia axillaris HOM05D010238 ORTHO05D010031 1.8e-09 67.4 55 65.5
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 5.2e-09 65.9 207 27.1
Rhsim02G0190400 Rhododendron simsii HOM05D010927 ORTHO05D010031 8.8e-09 65.1 74 43.2
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.5e-08 64.3 195 25.6
Rhsim02G0192200 Rhododendron simsii HOM05D010927 ORTHO05D010031 2.0e-08 63.9 102 39.2
QL10p010801 Quercus lobata HOM05D020907 ORTHO05D010031 3.4e-08 63.2 90 40.0
Rhsim02G0190000 Rhododendron simsii HOM05D010927 ORTHO05D010031 3.4e-08 63.2 90 40.0
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 4.4e-08 62.8 213 27.2
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 4.4e-08 62.8 218 27.5
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 5.7e-08 62.4 215 25.1
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.8e-08 61.6 204 27.0
RhsimUnG0204100 Rhododendron simsii HOM05D010927 ORTHO05D010031 9.8e-08 61.6 108 34.3
RhsimUnG0218700 Rhododendron simsii HOM05D010927 ORTHO05D010031 1.3e-07 61.2 85 40.0
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 1.7e-07 60.8 100 29.0
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 8.3e-07 58.5 196 25.0
RhsimUnG0071700 Rhododendron simsii HOM05D010927 ORTHO05D010031 8.3e-07 58.5 75 37.3
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.4e-06 57.8 78 43.6
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 3.1e-06 56.6 80 42.5
Prupe.1G470300 Prunus persica HOM05D010238 ORTHO05D010031 4.1e-06 56.2 117 29.9
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 5.4e-06 55.8 74 43.2


User provided reference genes

Program Settings