Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.6e-82 309.3 148 100.0
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-33 146.4 135 56.3
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 2.9e-31 139.0 89 76.4
Sopen08g021590 Solanum pennellii HOM05D007931 ORTHO05D010331 1.6e-26 123.2 71 85.9
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 6.2e-26 121.3 80 77.5
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-24 117.1 137 48.2
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-23 112.8 135 44.4
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.9e-23 111.7 137 46.0
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.1e-22 108.6 86 61.6
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.4e-22 108.2 128 47.7
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.0e-20 102.4 136 44.1
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.5e-19 100.1 76 67.1
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.3e-19 97.8 122 44.3
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.3e-19 97.8 118 48.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-18 96.7 72 69.4
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 1.2e-16 90.5 57 82.5
PGSC0003DMG400014334 Solanum tuberosum HOM05D007931 ORTHO05D010331 2.0e-16 89.7 89 51.7
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.8e-16 88.2 118 44.9
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.4e-15 84.7 76 51.3
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 6.4e-15 84.7 75 56.0
Nitab4.5_0001238g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.4e-14 82.8 64 65.6
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.4e-14 81.6 58 72.4
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 7.1e-14 81.3 68 60.3
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.2e-14 80.9 109 42.2
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-13 80.5 118 43.2
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.0e-13 78.2 116 43.1
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.0e-13 78.2 68 58.8
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-12 77.4 118 42.4
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.1e-12 75.1 134 30.6
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.1e-11 73.9 54 66.7
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.6e-11 71.6 58 63.8
Nitab4.5_0000139g0190 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.5e-11 70.9 52 65.4
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-10 68.9 68 52.9
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-10 68.9 58 55.2
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.6e-10 68.9 58 62.1
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 6.2e-10 68.2 54 61.1
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 8.1e-10 67.8 84 44.0
BolC2t07957H Brassica oleracea HOM05D001239 ORTHO05D000925 6.8e-09 64.7 133 33.1
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 6.8e-09 64.7 140 29.3
Nitab4.5_0005292g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-08 63.9 67 53.7
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.2e-08 63.9 58 56.9
PGSC0003DMG400002205 Solanum tuberosum HOM05D000927 ORTHO05D000850 2.6e-08 62.8 40 77.5
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.8e-08 61.6 50 64.0
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 9.9e-08 60.8 109 38.5
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.9e-07 59.3 79 32.9
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.9e-06 56.6 132 28.8
Nitab4.5_0000132g0210 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-06 56.6 55 49.1
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-06 56.6 79 35.4
Sopen05g005220 Solanum pennellii HOM05D000613 ORTHO05D010331 1.9e-06 56.6 33 75.8
Nitab4.5_0000515g0140 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.2e-06 55.8 50 60.0
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.2e-06 55.5 67 46.3
Nitab4.5_0010978g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.2e-06 55.5 62 40.3
BcaC02g10519 Brassica carinata HOM05D001239 ORTHO05D000925 5.4e-06 55.1 135 22.2
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.4e-06 55.1 134 29.1


User provided reference genes

Program Settings