Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067600.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 4.5e-97 357.8 170 100.0
Solyc08g066780.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 7.7e-57 224.2 120 87.5
Solyc08g067560.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 3.3e-55 218.8 141 78.7
PGSC0003DMG400002256 Solanum tuberosum HOM05D009941 ORTHO05D012025 1.7e-48 196.4 121 79.3
PGSC0003DMG400002257 Solanum tuberosum HOM05D009941 ORTHO05D012025 2.8e-46 189.1 120 75.8
Sopen08g021530 Solanum pennellii HOM05D009941 ORTHO05D012025 3.6e-46 188.7 131 74.8
Sopen08g021500 Solanum pennellii HOM05D009941 ORTHO05D012025 1.8e-45 186.4 126 77.8
PGSC0003DMG400002263 Solanum tuberosum HOM05D009941 ORTHO05D012025 4.0e-45 185.3 123 75.6
PGSC0003DMG400002264 Solanum tuberosum HOM05D009941 ORTHO05D012025 6.8e-45 184.5 121 75.2
Solyc08g067580.3 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.6e-44 182.6 122 77.0
Solyc12g017620.1 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.2e-41 173.7 126 73.8
PGSC0003DMG400037004 Solanum tuberosum HOM05D009941 ORTHO05D012025 1.0e-40 170.6 121 69.4
Nitab4.5_0002140g0010 Nicotiana tabacum HOM05D009941 ORTHO05D012025 1.4e-29 133.7 127 58.3
Cc11_g01580 Coffea canephora HOM05D009941 ORTHO05D012025 1.4e-18 97.1 125 44.8
Cc11_g01570 Coffea canephora HOM05D009941 ORTHO05D012025 8.1e-14 81.3 130 38.5
Sopen12g008360 Solanum pennellii HOM05D009941 ORTHO05D012025 6.9e-13 78.2 45 80.0
Cc11_g01590 Coffea canephora HOM05D009941 ORTHO05D012025 9.0e-13 77.8 119 40.3
Actinidia15701 Actinidia chinensis HOM05D009941 ORTHO05D012025 3.4e-12 75.9 120 38.3
Manes.16G117901 Manihot esculenta HOM05D009941 ORTHO05D012025 1.9e-10 70.1 123 38.2
Lsat_1_v5_gn_1_45361 Lactuca sativa HOM05D009941 ORTHO05D012025 9.3e-10 67.8 115 34.8
Rhsim10G0024300 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.2e-09 67.4 108 37.0
Rhsim10G0024400 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.2e-09 67.4 108 37.0
Manes.16G117801 Manihot esculenta HOM05D009941 ORTHO05D012025 7.9e-09 64.7 115 37.4
Dinv11600 Davidia involucrata HOM05D009941 ORTHO05D012025 5.1e-08 62.0 128 35.2


User provided reference genes

Program Settings