Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 6.6e-122 440.7 212 100.0
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 3.7e-109 398.3 198 97.5
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 2.3e-106 389.0 198 96.5
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.6e-96 356.3 198 88.9
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.8e-96 355.5 200 88.0
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.3e-93 346.7 203 86.2
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.8e-88 328.2 202 80.7
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 6.9e-87 324.3 198 79.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 9.9e-86 320.5 202 78.7
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.3e-85 320.1 198 79.8
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.3e-85 320.1 201 79.1
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 3.8e-85 318.5 198 80.3
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.9e-85 318.2 198 78.8
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 8.4e-85 317.4 208 76.4
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.1e-84 317.0 198 79.8
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 2.4e-84 315.8 202 78.7
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 4.2e-84 315.1 209 76.1
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.4e-84 314.7 198 79.8
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.1e-84 314.3 198 79.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 7.1e-84 314.3 206 76.7
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 9.3e-84 313.9 199 77.9
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 3.5e-83 312.0 204 76.5
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 6.0e-83 311.2 200 79.0
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 7.9e-83 310.8 202 76.7
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 7.9e-83 310.8 202 76.2
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.0e-82 308.9 202 76.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 3.9e-82 308.5 203 75.4
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 6.6e-82 307.8 205 74.1
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 9.6e-81 303.9 201 72.1
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 9.6e-81 303.9 213 72.3
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.3e-80 303.5 199 74.9
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.3e-80 303.5 194 77.3
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.6e-80 303.1 167 85.0
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 2.8e-80 302.4 204 73.0
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.6e-80 302.0 205 73.2
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.8e-80 301.6 199 73.4
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 4.8e-80 301.6 221 69.7
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 6.2e-80 301.2 199 75.9
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 8.1e-80 300.8 199 73.4
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.1e-79 300.4 204 74.5
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 3.1e-79 298.9 204 73.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.1e-79 298.9 199 73.9
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.0e-79 298.5 212 71.2
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 6.9e-79 297.7 198 74.2
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.0e-78 296.2 167 80.2
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.0e-78 296.2 200 73.5
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 4.5e-78 295.0 179 78.2
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 4.5e-78 295.0 191 73.8
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 4.5e-78 295.0 198 74.2
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 4.5e-78 295.0 197 73.6
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 5.8e-78 294.7 202 71.8
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 9.9e-78 293.9 200 72.0
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 9.9e-78 293.9 201 71.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 9.9e-78 293.9 201 71.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 9.9e-78 293.9 201 71.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 9.9e-78 293.9 201 71.6
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.3e-77 293.5 222 66.2
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.3e-77 293.5 201 71.6
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.3e-77 293.5 191 74.3
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.7e-77 293.1 201 71.6
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 2.2e-77 292.7 210 71.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.9e-77 292.4 205 69.3
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 4.9e-77 291.6 198 71.2
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 4.9e-77 291.6 183 78.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 8.4e-77 290.8 194 74.7
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.4e-76 290.0 205 69.8
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.9e-76 289.7 231 66.7
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.4e-76 289.3 198 71.7
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.2e-76 288.5 198 72.7
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 4.2e-76 288.5 198 72.2
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 9.3e-76 287.3 179 76.5
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.6e-75 286.6 186 75.3
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.7e-75 285.8 199 71.9
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.7e-75 285.8 202 69.3
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 3.5e-75 285.4 187 74.9
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 4.6e-75 285.0 198 70.7
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 4.6e-75 285.0 204 67.2
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.8e-74 283.1 194 71.6
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.8e-72 275.8 153 84.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 5.3e-71 271.6 171 76.0
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 4.2e-68 261.9 212 62.3
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 4.2e-68 261.9 209 65.6
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 7.9e-67 257.7 164 75.6
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.6e-64 250.0 169 74.0
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.1e-64 249.6 174 72.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.1e-64 249.6 180 72.2
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 3.7e-64 248.8 139 81.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.1e-63 247.3 183 69.4
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.8e-63 246.5 137 80.3
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.3e-61 240.4 175 70.3
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 3.8e-61 238.8 168 65.5
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.5e-60 236.1 186 62.4
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.2e-60 235.7 138 79.7
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 7.2e-60 234.6 154 67.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.7e-56 222.2 168 61.9
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 6.3e-56 221.5 152 69.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.0e-53 214.2 161 67.7
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.6e-51 206.8 111 85.6
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 9.1e-47 191.0 154 59.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 7.9e-43 177.9 178 54.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 7.0e-31 138.3 140 47.9
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 8.8e-18 94.7 165 38.8
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.3e-08 64.3 133 35.3
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.8e-07 60.5 37 73.0
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 4.6e-06 55.8 137 31.4


User provided reference genes

Program Settings