Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067380.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.2e-97 359.8 174 100.0
PGSC0003DMG400007385 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.3e-72 276.6 146 92.5
QL11p008844 Quercus lobata HOM05D000092 ORTHO05D000042 6.5e-27 124.8 145 44.8
MD11G1020500 Malus domestica HOM05D000092 ORTHO05D000042 6.3e-22 108.2 145 38.6
GSVIVG01029290001 Vitis vinifera HOM05D000092 ORTHO05D000042 8.3e-22 107.8 141 39.7
RcHm_v2.0_Chr3g0473571 Rosa chinensis HOM05D000092 ORTHO05D000042 5.9e-20 101.7 173 34.7
FAN17G0425 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.0e-19 100.9 151 39.7
Dinv41192 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-19 100.1 144 40.3
GSVIVG01029297001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.9e-19 99.4 148 36.5
GSVIVG01029299001 Vitis vinifera HOM05D000092 ORTHO05D000042 3.8e-19 99.0 144 34.7
RcHm_v2.0_Chr3g0473481 Rosa chinensis HOM05D000092 ORTHO05D000042 6.6e-19 98.2 135 38.5
RcHm_v2.0_Chr3g0473531 Rosa chinensis HOM05D000092 ORTHO05D000042 6.6e-19 98.2 135 38.5
RcHm_v2.0_Chr5g0061301 Rosa chinensis HOM05D000092 ORTHO05D000042 1.9e-18 96.7 150 37.3
RcHm_v2.0_Chr3g0473341 Rosa chinensis HOM05D000092 ORTHO05D000042 2.5e-18 96.3 162 34.6
RcHm_v2.0_Chr5g0061291 Rosa chinensis HOM05D000092 ORTHO05D000042 1.6e-17 93.6 150 36.0
FAN11G3689 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.0e-17 91.3 145 39.3
MD11G1019800 Malus domestica HOM05D000092 ORTHO05D000042 8.0e-17 91.3 145 34.5
FvH4_3g44000 Fragaria vesca HOM05D000759 ORTHO05D000574 1.4e-16 90.5 145 38.6
RcHm_v2.0_Chr5g0079791 Rosa chinensis HOM05D000092 ORTHO05D000042 1.4e-16 90.5 145 37.9
RcHm_v2.0_Chr5g0080261 Rosa chinensis HOM05D000092 ORTHO05D000042 1.4e-16 90.5 152 33.6
FAN25G3051 Fragaria x ananassa HOM05D000759 ORTHO05D000574 2.3e-16 89.7 145 38.6
RcHm_v2.0_Chr5g0080151 Rosa chinensis HOM05D000092 ORTHO05D000042 3.0e-16 89.4 152 32.9
RcHm_v2.0_Chr5g0080241 Rosa chinensis HOM05D000092 ORTHO05D000042 8.9e-16 87.8 145 37.2
QL11p008972 Quercus lobata HOM05D000092 ORTHO05D000042 1.2e-15 87.4 141 37.6
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 1.2e-15 87.4 145 36.6
RcHm_v2.0_Chr5g0079811 Rosa chinensis HOM05D000092 ORTHO05D000042 2.0e-15 86.7 147 32.0
FAN11G0487 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.6e-15 86.3 145 36.6
FAN17G0067 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.6e-15 86.3 150 35.3
RcHm_v2.0_Chr3g0473441 Rosa chinensis HOM05D000092 ORTHO05D000042 4.4e-15 85.5 144 34.0
FvH4_3g38670 Fragaria vesca HOM05D000092 ORTHO05D000042 5.8e-15 85.1 144 35.4
FAN25G2738 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.8e-15 85.1 150 35.3
RcHm_v2.0_Chr3g0473291 Rosa chinensis HOM05D000092 ORTHO05D000042 5.8e-15 85.1 146 36.3
RcHm_v2.0_Chr5g0079881 Rosa chinensis HOM05D000092 ORTHO05D000042 5.8e-15 85.1 150 36.7
RcHm_v2.0_Chr5g0059311 Rosa chinensis HOM05D000092 ORTHO05D000042 9.8e-15 84.3 143 33.6
RcHm_v2.0_Chr5g0069731 Rosa chinensis HOM05D000092 ORTHO05D000042 1.7e-14 83.6 138 34.8
RcHm_v2.0_Chr3g0473561 Rosa chinensis HOM05D000092 ORTHO05D000042 2.2e-14 83.2 144 35.4
FvH4_5g01271 Fragaria vesca HOM05D000092 ORTHO05D000042 2.9e-14 82.8 148 34.5
FAN11G3620 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.7e-14 82.4 145 34.5
FvH4_5g02970 Fragaria vesca HOM05D000092 ORTHO05D000042 1.4e-13 80.5 148 33.8
RcHm_v2.0_Chr5g0079591 Rosa chinensis HOM05D000092 ORTHO05D000042 1.4e-13 80.5 152 34.2
FAN11G3794 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.4e-13 79.7 150 34.7
FvH4_3g44070 Fragaria vesca HOM05D000092 ORTHO05D000042 3.2e-13 79.3 150 33.3
FAN18G0742 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.2e-13 79.3 148 33.8
FvH4_7g31110 Fragaria vesca HOM05D000092 ORTHO05D000042 7.0e-13 78.2 142 31.7
FAN08G2887 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.0e-13 78.2 148 33.8
FAN25G2124 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.0e-13 78.2 145 34.5
FvH4_3g35820 Fragaria vesca HOM05D000092 ORTHO05D000042 1.6e-12 77.0 145 33.8
RcHm_v2.0_Chr5g0079861 Rosa chinensis HOM05D000092 ORTHO05D000042 2.0e-12 76.6 150 30.7
FvH4_5g27640 Fragaria vesca HOM05D000092 ORTHO05D000042 2.7e-12 76.3 147 34.0
FAN06G0162 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-12 76.3 142 31.0
FAN16G2679 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-12 76.3 140 33.6
FAN18G1632 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-12 76.3 147 34.0
RcHm_v2.0_Chr5g0064111 Rosa chinensis HOM05D000092 ORTHO05D000042 2.7e-12 76.3 145 33.1
FvH4_3g44030 Fragaria vesca HOM05D000092 ORTHO05D000042 3.5e-12 75.9 152 29.6
FAN11G1389 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.5e-12 75.9 152 29.6
FvH4_7g06680 Fragaria vesca HOM05D000092 ORTHO05D000042 6.0e-12 75.1 144 31.2
FAN11G0546 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.0e-12 75.1 148 33.8
RcHm_v2.0_Chr5g0064081 Rosa chinensis HOM05D001215 ORTHO05D000042 6.0e-12 75.1 145 33.8
FvH4_3g37980 Fragaria vesca HOM05D000092 ORTHO05D000042 1.0e-11 74.3 145 31.0
FAN14G4314 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.3e-11 73.9 152 34.2
FAN03G0673 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.3e-11 73.2 130 32.3
FAN17G1498 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.3e-11 73.2 150 32.0
RcHm_v2.0_Chr5g0080371 Rosa chinensis HOM05D000092 ORTHO05D000042 3.0e-11 72.8 145 33.1
FAN10G3520 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.6e-11 71.2 130 31.5
RcHm_v2.0_Chr5g0080311 Rosa chinensis HOM05D000092 ORTHO05D000042 8.6e-11 71.2 150 33.3
FAN25G3071 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.9e-10 70.1 139 33.8
Prupe.1G542800 Prunus persica HOM05D000092 ORTHO05D000042 1.9e-10 70.1 146 32.2
FAN21G0471 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.5e-10 69.7 142 33.8
RcHm_v2.0_Chr3g0483491 Rosa chinensis HOM05D000092 ORTHO05D000042 2.5e-10 69.7 146 30.1
FvH4_3g43390 Fragaria vesca HOM05D000092 ORTHO05D000042 3.3e-10 69.3 139 31.7
FAN11G0419 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.3e-10 69.3 154 31.8
FAN11G3612 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.3e-10 68.9 142 32.4
FAN21G1512 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.3e-10 68.9 140 33.6
FvH4_3g43950 Fragaria vesca HOM05D000092 ORTHO05D000042 5.6e-10 68.6 154 29.9
FAN11G3840 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.3e-10 68.2 149 28.9
QL11p008997 Quercus lobata HOM05D000092 ORTHO05D000042 1.6e-09 67.0 141 32.6
FvH4_3g43650 Fragaria vesca HOM05D000092 ORTHO05D000042 2.8e-09 66.2 140 32.9
FAN11G2056 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.8e-09 66.2 107 34.6
FAN11G2559 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.6e-09 65.9 146 28.1
FAN11G3889 Fragaria x ananassa HOM05D000038 ORTHO05D000143 3.6e-09 65.9 142 31.0
FvH4_7g12671 Fragaria vesca HOM05D000092 ORTHO05D000042 4.7e-09 65.5 101 34.7
FAN01G2948 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.7e-09 65.5 101 34.7
FAN10G2141 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.7e-09 65.5 142 31.7
FAN21G3689 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.7e-09 65.5 116 35.3
RcHm_v2.0_Chr1g0353711 Rosa chinensis HOM05D000092 ORTHO05D000042 6.2e-09 65.1 139 29.5
FAN11G0977 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.0e-09 64.7 139 30.9
FAN11G0261 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.1e-08 64.3 156 29.5
FvH4_3g45680 Fragaria vesca HOM05D000092 ORTHO05D000042 1.4e-08 63.9 147 27.9
FvH4_6g52372 Fragaria vesca HOM05D000092 ORTHO05D000042 1.4e-08 63.9 142 29.6
FvH4_3g44680 Fragaria vesca HOM05D000092 ORTHO05D000042 3.1e-08 62.8 146 27.4
FAN11G1401 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.1e-08 62.8 151 27.8
MD15G1398400 Malus domestica HOM05D000092 ORTHO05D000042 3.1e-08 62.8 110 32.7
FvH4_3g43630 Fragaria vesca HOM05D000092 ORTHO05D000042 4.0e-08 62.4 140 30.7
FvH4_3g45720 Fragaria vesca HOM05D000092 ORTHO05D000042 5.2e-08 62.0 145 27.6
FvH4_3g43610 Fragaria vesca HOM05D000092 ORTHO05D000042 6.8e-08 61.6 140 30.7
FAN16G0155 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.8e-08 61.6 144 27.8
FAN21G1621 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.8e-08 61.6 144 31.9
FAN06G2052 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.9e-08 61.2 144 31.9
FAN21G0810 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.2e-07 60.8 157 29.9
FvH4_3g43940 Fragaria vesca HOM05D000092 ORTHO05D000042 1.5e-07 60.5 146 30.8
FvH4_6g01282 Fragaria vesca HOM05D000092 ORTHO05D000042 1.5e-07 60.5 143 30.8
FvH4_3g45730 Fragaria vesca HOM05D000092 ORTHO05D000042 2.0e-07 60.1 133 28.6
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 2.0e-07 60.1 144 28.5
FvH4_3g43960 Fragaria vesca HOM05D000092 ORTHO05D000042 2.6e-07 59.7 151 27.2
Dinv15264 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-07 59.3 164 32.9
FAN21G2001 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.4e-07 59.3 104 34.6
FvH4_3g43631 Fragaria vesca HOM05D000092 ORTHO05D000042 4.4e-07 58.9 139 30.9
Atru.chr6.3508 Acer truncatum HOM05D000092 ORTHO05D000042 7.5e-07 58.2 153 24.8
FAN05G0791 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.5e-07 58.2 105 30.5
FvH4_3g44561 Fragaria vesca HOM05D000092 ORTHO05D000042 9.8e-07 57.8 144 27.1
FAN04G1123 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.3e-06 57.4 89 38.2
Dinv15266 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-06 57.0 139 32.4
FvH4_7g08890 Fragaria vesca HOM05D000092 ORTHO05D000042 1.7e-06 57.0 143 30.8
FAN25G0580 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.2e-06 56.6 129 25.6
FAN21G2768 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.9e-06 56.2 132 31.1
COL.COLO4_32833 Corchorus olitorius HOM05D000092 ORTHO05D000042 3.7e-06 55.8 112 30.4
FAN10G1378 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.7e-06 55.8 144 30.6
FAN21G3195 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.7e-06 55.8 102 33.3
FvH4_3g43660 Fragaria vesca HOM05D000092 ORTHO05D000042 4.9e-06 55.5 132 31.1
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 8.3e-06 54.7 130 30.8
FvH4_3g45631 Fragaria vesca HOM05D000092 ORTHO05D000042 8.3e-06 54.7 142 26.1
FvH4_3g45641 Fragaria vesca HOM05D000092 ORTHO05D000042 8.3e-06 54.7 142 26.1
FAN11G3389 Fragaria x ananassa HOM05D000092 ORTHO05D000042 8.3e-06 54.7 150 28.0


User provided reference genes

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