Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 5.1e-151 537.7 274 100.0
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 6.7e-143 510.8 271 96.3
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.1e-126 456.8 258 91.5
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 8.4e-45 184.9 317 43.8
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.5e-25 120.2 370 30.0
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.3e-24 117.9 353 32.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 2.2e-24 117.1 340 30.9
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.2e-24 117.1 344 31.4
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.1e-23 114.8 332 31.9
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 2.4e-23 113.6 382 31.2
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 3.1e-23 113.2 356 30.1
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 6.9e-23 112.1 364 31.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 6.9e-23 112.1 349 31.8
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 2.6e-22 110.2 370 30.8
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 3.4e-22 109.8 368 30.4
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.5e-22 109.4 352 29.3
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.7e-21 107.5 369 28.7
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 3.8e-21 106.3 354 29.9
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 5.0e-21 105.9 348 30.2
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 2.5e-20 103.6 260 32.3
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 5.5e-20 102.4 257 33.5
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 7.2e-20 102.1 364 30.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-19 101.3 364 29.9
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 7.9e-19 98.6 309 31.7
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 7.9e-19 98.6 352 27.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.0e-18 98.2 352 28.7
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.4e-18 97.8 351 29.1
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.8e-18 97.4 342 28.1
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 2.3e-18 97.1 356 27.2
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 3.9e-18 96.3 300 31.3
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 6.7e-18 95.5 356 28.9
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 6.7e-18 95.5 236 31.8
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 6.7e-18 95.5 356 28.7
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.1e-17 94.7 360 29.2
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.5e-17 93.6 353 28.3
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 7.4e-17 92.0 255 31.4
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.7e-16 90.9 226 32.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.2e-16 90.5 394 24.4
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.8e-16 90.1 415 27.5
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 3.1e-15 86.7 277 28.5
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 5.3e-15 85.9 401 25.9
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 9.1e-15 85.1 379 26.4
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.5e-14 84.3 404 26.2
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.6e-14 83.6 419 26.0
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 3.4e-14 83.2 242 28.1
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 4.5e-14 82.8 334 27.5
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.0e-13 81.6 422 27.3
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.9e-13 80.1 423 25.8
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.5e-12 77.0 343 30.0
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 4.2e-12 76.3 186 31.2
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 4.2e-12 76.3 67 55.2
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 4.2e-12 76.3 67 55.2
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 5.5e-12 75.9 405 24.9
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 7.9e-11 72.0 74 54.1
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 7.9e-11 72.0 199 29.1
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.0e-10 71.6 247 27.5
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.4e-10 71.2 192 34.9
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.8e-10 70.9 93 45.2
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 2.3e-10 70.5 287 27.2
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 3.9e-10 69.7 395 26.1
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.5e-09 67.8 68 54.4
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.5e-09 67.8 388 25.3
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 2.0e-09 67.4 165 35.8
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 3.3e-09 66.6 211 28.0
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 3.7e-08 63.2 283 26.1
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 4.8e-08 62.8 369 25.5
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 8.2e-08 62.0 263 25.5
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.1e-07 61.6 392 24.0
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 1.8e-07 60.8 214 30.8
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 3.1e-07 60.1 370 24.1
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 5.3e-07 59.3 67 50.7
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 6.9e-07 58.9 67 44.8
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 1.5e-06 57.8 72 48.6
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 5.9e-06 55.8 74 47.3
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 7.7e-06 55.5 320 24.1
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 7.7e-06 55.5 320 24.1


User provided reference genes

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