Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g066780.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.4e-110 402.9 200 100.0
Solyc08g067600.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 9.1e-57 224.2 120 87.5
PGSC0003DMG400002256 Solanum tuberosum HOM05D009941 ORTHO05D012025 5.7e-51 204.9 120 82.5
Sopen08g021530 Solanum pennellii HOM05D009941 ORTHO05D012025 3.8e-47 192.2 146 68.5
PGSC0003DMG400002264 Solanum tuberosum HOM05D009941 ORTHO05D012025 8.6e-47 191.0 120 78.3
PGSC0003DMG400002257 Solanum tuberosum HOM05D009941 ORTHO05D012025 1.5e-46 190.3 120 78.3
Solyc08g067560.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 4.2e-46 188.7 123 78.0
Sopen08g021500 Solanum pennellii HOM05D009941 ORTHO05D012025 4.2e-46 188.7 125 77.6
PGSC0003DMG400002263 Solanum tuberosum HOM05D009941 ORTHO05D012025 5.5e-46 188.3 122 77.9
Solyc08g067580.3 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.6e-45 186.8 120 76.7
Solyc12g017620.1 Solanum lycopersicum HOM05D009941 ORTHO05D012025 7.5e-43 177.9 125 74.4
PGSC0003DMG400037004 Solanum tuberosum HOM05D009941 ORTHO05D012025 6.3e-42 174.9 120 71.7
Nitab4.5_0002140g0010 Nicotiana tabacum HOM05D009941 ORTHO05D012025 2.0e-27 126.7 120 58.3
Cc11_g01580 Coffea canephora HOM05D009941 ORTHO05D012025 3.5e-16 89.4 131 42.0
Sopen12g008360 Solanum pennellii HOM05D009941 ORTHO05D012025 8.1e-13 78.2 47 76.6
Cc11_g01570 Coffea canephora HOM05D009941 ORTHO05D012025 4.0e-12 75.9 120 40.0
Cc11_g01590 Coffea canephora HOM05D009941 ORTHO05D012025 2.6e-11 73.2 119 41.2
Actinidia15701 Actinidia chinensis HOM05D009941 ORTHO05D012025 7.6e-11 71.6 120 36.7
Lsat_1_v5_gn_1_45361 Lactuca sativa HOM05D009941 ORTHO05D012025 1.3e-10 70.9 123 34.1
Manes.16G117901 Manihot esculenta HOM05D009941 ORTHO05D012025 1.4e-09 67.4 121 40.5
Rhsim10G0024300 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.4e-09 67.4 110 37.3
Rhsim10G0024400 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.4e-09 67.4 110 37.3
Manes.16G117801 Manihot esculenta HOM05D009941 ORTHO05D012025 2.4e-09 66.6 117 35.0
Dinv11600 Davidia involucrata HOM05D009941 ORTHO05D012025 5.4e-09 65.5 111 39.6


User provided reference genes

Program Settings