Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 2.1e-54 215.3 101 100.0
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.1e-50 203.0 101 95.0
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 1.2e-49 199.5 101 92.1
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.3e-40 168.7 101 83.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 8.2e-38 160.2 99 79.8
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.6e-36 155.2 99 76.8
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 1.9e-31 139.0 109 59.6
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 2.4e-29 132.1 101 59.4
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 5.3e-29 131.0 107 58.9
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 6.9e-29 130.6 102 60.8
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.5e-28 129.4 71 73.2
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.0e-28 129.0 98 63.3
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 2.6e-28 128.6 101 56.4
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 3.4e-28 128.3 103 58.3
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.4e-28 128.3 110 55.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.5e-28 127.9 96 60.4
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 1.0e-27 126.7 101 56.4
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.3e-27 126.3 101 57.4
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.7e-27 125.9 102 57.8
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 3.8e-27 124.8 102 56.9
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 5.0e-27 124.4 101 55.4
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 5.0e-27 124.4 104 56.7
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 6.5e-27 124.0 82 65.9
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 6.5e-27 124.0 103 55.3
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 8.5e-27 123.6 107 54.2
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 8.5e-27 123.6 103 58.3
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 1.1e-26 123.2 101 58.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.1e-26 123.2 104 55.8
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.4e-26 122.9 92 64.1
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 1.9e-26 122.5 57 87.7
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 3.2e-26 121.7 89 65.2
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 3.2e-26 121.7 103 58.3
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.2e-26 121.7 103 57.3
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 4.2e-26 121.3 102 58.8
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 4.2e-26 121.3 102 55.9
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 57.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 58.3
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 5.5e-26 120.9 103 55.3
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 5.5e-26 120.9 75 72.0
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.2e-26 120.6 103 59.2
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 9.4e-26 120.2 100 58.0
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.2e-25 119.8 101 52.5
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.1e-25 119.0 103 58.3
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.6e-25 118.2 53 92.5
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 3.6e-25 118.2 110 53.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 7.9e-25 117.1 78 66.7
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 7.9e-25 117.1 60 78.3
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 7.9e-25 117.1 86 57.0
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.4e-24 116.3 102 54.9
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.8e-24 115.9 104 52.9
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 1.8e-24 115.9 72 66.7
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.8e-24 115.9 102 51.0
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 2.3e-24 115.5 102 54.9
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 2.3e-24 115.5 106 53.8
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.0e-24 115.2 106 56.6
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 5.1e-24 114.4 102 57.8
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.1e-24 114.4 102 53.9
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 5.1e-24 114.4 103 56.3
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 6.7e-24 114.0 50 94.0
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 6.7e-24 114.0 102 54.9
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 6.7e-24 114.0 109 54.1
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.1e-23 113.2 55 85.5
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.1e-23 113.2 52 88.5
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.1e-23 113.2 102 56.9
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.5e-23 112.8 108 53.7
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.5e-23 112.8 108 53.7
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.5e-23 112.8 108 53.7
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 1.5e-23 112.8 105 55.2
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 2.5e-23 112.1 100 55.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 3.3e-23 111.7 52 88.5
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 3.3e-23 111.7 104 49.0
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 4.3e-23 111.3 73 68.5
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 4.3e-23 111.3 107 53.3
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.3e-23 111.3 108 55.6
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 4.3e-23 111.3 105 56.2
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 4.3e-23 111.3 108 47.2
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 4.3e-23 111.3 109 54.1
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 5.7e-23 110.9 58 77.6
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 7.4e-23 110.5 94 55.3
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 7.4e-23 110.5 68 72.1
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 1.7e-22 109.4 53 84.9
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.8e-22 108.6 95 55.8
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 2.8e-22 108.6 67 65.7
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 3.7e-22 108.2 55 80.0
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 3.7e-22 108.2 52 82.7
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 6.3e-22 107.5 50 88.0
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 6.3e-22 107.5 100 55.0
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 8.2e-22 107.1 77 62.3
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 8.2e-22 107.1 97 55.7
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.4e-21 106.3 50 86.0
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 1.4e-21 106.3 96 55.2
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.8e-21 105.9 108 52.8
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.8e-21 105.9 108 52.8
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.8e-21 105.9 108 52.8
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.3e-21 104.4 105 53.3
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 5.3e-21 104.4 62 69.4
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 6.9e-21 104.0 62 69.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 1.5e-20 102.8 112 49.1
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.5e-20 102.8 93 53.8
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 2.0e-20 102.4 98 52.0
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.0e-20 102.4 99 52.5
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 2.6e-20 102.1 101 56.4
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 5.9e-20 100.9 110 47.3
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 1.3e-19 99.8 50 80.0
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 1.3e-19 99.8 47 80.9
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 7.2e-18 94.0 102 43.1
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 4.7e-17 91.3 74 58.1
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 6.7e-16 87.4 103 43.7
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 1.7e-14 82.8 49 61.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.7e-14 81.6 55 58.2


User provided reference genes

Program Settings