Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g065765.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 1.6e-58 229.2 111 100.0
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 3.9e-33 144.8 107 66.4
Solyc10g039193.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 8.7e-33 143.7 107 64.5
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-32 143.3 109 65.1
Solyc05g150110.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 8.1e-31 137.1 98 66.3
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 1.8e-30 136.0 107 63.6
Solyc02g081087.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 8.4e-28 127.1 100 63.0
PGSC0003DMG400042404 Solanum tuberosum HOM05D000107 ORTHO05D014265 1.0e-20 103.6 95 61.1
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 8.2e-15 84.0 77 53.2
AUR62042815 Chenopodium quinoa HOM05D000107 ORTHO05D016691 1.2e-13 80.1 90 43.3
AUR62030809 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.4e-13 78.6 93 41.9
AUR62018241 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.5e-13 78.2 97 39.2
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 4.5e-13 78.2 97 40.2
Ah.01g009330 Amaranthus hybridus HOM05D000107 ORTHO05D000062 2.2e-12 75.9 108 38.9
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.8e-12 75.1 94 39.4
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 1.1e-11 73.6 42 73.8
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.5e-11 71.2 108 37.0
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.5e-11 71.2 108 37.0
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.2e-10 70.1 108 37.0
AUR62035729 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-10 68.9 100 39.0
AUR62040123 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-10 68.9 105 32.4
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.1e-10 67.8 113 33.6
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-09 66.6 114 32.5
AUR62033024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-09 66.6 114 32.5
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-09 66.6 113 33.6
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.8e-09 66.2 113 31.9
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.3e-09 65.9 113 32.7
AUR62022417 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.7e-09 64.3 112 33.9
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.7e-09 64.3 104 36.5
Ca_02957_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-08 63.5 98 33.7
AUR62031350 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-08 63.2 113 31.9
AUR62036836 Chenopodium quinoa HOM05D000107 ORTHO05D016691 3.3e-08 62.0 113 31.0
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 4.3e-08 61.6 99 37.4
Sopen09g017230 Solanum pennellii HOM05D000107 ORTHO05D014265 5.7e-08 61.2 68 52.9
AUR62013915 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.7e-08 60.5 85 38.8
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.7e-08 60.5 99 32.3
AUR62043995 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.7e-08 60.5 100 36.0
PGSC0003DMG400043689 Solanum tuberosum HOM05D000107 ORTHO05D014265 9.7e-08 60.5 56 57.1
EL10Ac9g22743 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-07 60.1 107 31.8
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-07 60.1 113 31.0
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-07 60.1 96 36.5
EL10Ac1g01842 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-07 59.7 107 31.8
AUR62029632 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-07 59.7 85 38.8
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-07 59.3 112 30.4
AUR62043993 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-07 59.3 91 37.4
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 2.2e-07 59.3 94 33.0
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.7e-07 58.5 85 38.8
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.7e-07 58.5 115 31.3
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.8e-07 58.2 100 37.0
AUR62014956 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-07 58.2 113 31.9
AUR62027609 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-07 58.2 90 34.4
AUR62034994 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.2e-07 57.4 85 37.6
Solyc05g040065.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 8.2e-07 57.4 48 58.3
AUR62042259 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-06 57.0 99 35.4
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 1.4e-06 56.6 85 37.6
AUR62026240 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.8e-06 56.2 85 36.5
AUR62026707 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.1e-06 55.5 85 35.3
AUR62018146 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-06 55.1 109 29.4
AUR62019544 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-06 55.1 62 43.5
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.1e-06 55.1 51 52.9
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 5.3e-06 54.7 103 28.2
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.9e-06 54.3 107 28.0


User provided reference genes

Program Settings