Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 4.5e-48 194.1 90 100.0
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 4.5e-48 194.1 90 100.0
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.9e-46 188.7 90 97.8
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 1.1e-41 172.9 94 86.2
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 6.0e-40 167.2 93 82.8
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 4.9e-34 147.5 94 75.5
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 2.7e-32 141.7 90 71.1
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.5e-30 136.0 94 66.0
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.6e-29 132.5 88 63.6
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.8e-29 131.7 75 73.3
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 4.7e-29 131.0 89 62.9
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 6.2e-29 130.6 90 66.7
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 8.1e-29 130.2 89 62.9
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 8.1e-29 130.2 89 62.9
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 2.3e-28 128.6 90 67.8
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 3.1e-28 128.3 94 66.0
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.1e-28 128.3 93 65.6
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 4.0e-28 127.9 87 62.1
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 5.2e-28 127.5 74 70.3
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 5.2e-28 127.5 72 75.0
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 5.2e-28 127.5 72 75.0
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 8.9e-28 126.7 72 76.4
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 8.9e-28 126.7 72 75.0
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 2.0e-27 125.6 78 70.5
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 2.0e-27 125.6 84 63.1
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 2.0e-27 125.6 88 60.2
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 2.6e-27 125.2 79 68.4
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 7.5e-27 123.6 90 65.6
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 7.5e-27 123.6 75 68.0
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.3e-26 122.9 90 63.3
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 2.2e-26 122.1 90 64.4
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 2.2e-26 122.1 77 68.8
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 2.2e-26 122.1 76 69.7
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 2.2e-26 122.1 70 75.7
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.9e-26 121.7 82 64.6
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 2.9e-26 121.7 80 62.5
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 2.9e-26 121.7 97 62.9
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 2.9e-26 121.7 77 68.8
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 4.9e-26 120.9 75 70.7
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 4.9e-26 120.9 70 74.3
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 6.4e-26 120.6 90 62.2
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 6.4e-26 120.6 77 68.8
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 6.4e-26 120.6 69 76.8
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 1.1e-25 119.8 78 66.7
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.4e-25 119.4 77 68.8
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 1.9e-25 119.0 90 61.1
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.9e-25 119.0 89 59.6
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.9e-25 119.0 90 60.0
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 2.4e-25 118.6 99 57.6
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.4e-25 118.6 77 66.2
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 3.2e-25 118.2 91 60.4
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 3.2e-25 118.2 89 61.8
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 5.4e-25 117.5 77 67.5
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 5.4e-25 117.5 74 66.2
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 5.4e-25 117.5 94 58.5
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 9.2e-25 116.7 76 64.5
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.2e-24 116.3 81 61.7
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 1.6e-24 115.9 81 61.7
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 2.1e-24 115.5 60 76.7
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 2.7e-24 115.2 90 60.0
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.7e-24 115.2 90 60.0
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 2.7e-24 115.2 66 84.8
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 2.7e-24 115.2 67 70.1
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 3.5e-24 114.8 89 57.3
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 3.5e-24 114.8 89 57.3
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 4.6e-24 114.4 75 65.3
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 4.6e-24 114.4 74 68.9
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 7.8e-24 113.6 90 58.9
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 7.8e-24 113.6 74 67.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.0e-23 113.2 83 62.7
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.3e-23 112.8 80 61.2
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.7e-23 112.5 98 53.1
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.7e-23 112.5 90 57.8
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 8.6e-23 110.2 68 70.6
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.1e-22 109.8 85 62.4
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.1e-22 109.8 85 62.4
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 1.5e-22 109.4 86 60.5
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.5e-22 109.4 116 48.3
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 4.3e-22 107.8 85 60.0
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 9.5e-22 106.7 85 58.8
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.6e-21 105.9 70 64.3
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.1e-21 105.5 59 74.6
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.1e-21 105.5 59 74.6
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 3.6e-21 104.8 85 57.6
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 4.7e-21 104.4 85 56.5
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 8.1e-21 103.6 78 55.1
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 1.8e-20 102.4 82 57.3
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 2.4e-20 102.1 71 57.7
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 8.9e-20 100.1 83 56.6
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 2.0e-19 99.0 68 60.3
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 3.4e-19 98.2 59 69.5
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 8.4e-18 93.6 58 63.8
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 8.4e-18 93.6 107 46.7
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.2e-17 91.3 79 50.6
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 9.2e-17 90.1 110 42.7
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 1.2e-16 89.7 56 66.1
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 1.2e-16 89.7 56 66.1
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 1.2e-16 89.7 63 52.4
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 2.7e-16 88.6 54 61.1
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 4.6e-16 87.8 67 52.2
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 2.3e-15 85.5 88 53.4
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.9e-15 84.7 78 51.3
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 6.6e-15 84.0 65 56.9
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.1e-13 79.0 47 70.2
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 1.1e-12 76.6 55 58.2
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.1e-12 76.6 81 45.7
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 3.5e-08 61.6 42 64.3
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 3.0e-07 58.5 42 50.0
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.1e-06 56.6 58 36.2


User provided reference genes

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