Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g061750.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-28 127.5 60 100.0
Solyc08g061710.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.6e-23 111.3 55 96.4
Solyc11g019890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.6e-23 111.3 55 96.4
Solyc11g061870.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.8e-23 110.2 55 94.5
Solyc11g061860.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.8e-23 109.4 55 94.5
Solyc11g061840.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.3e-22 109.0 55 94.5
PGSC0003DMG400044693 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-22 109.0 55 92.7
PGSC0003DMG400037617 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.2e-22 108.2 55 94.5
Solyc11g061830.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.7e-22 107.5 55 92.7
Solyc11g063710.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.7e-22 107.5 55 92.7
Solyc11g063740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.7e-22 107.5 55 92.7
Solyc08g061720.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.9e-22 107.1 54 94.4
Solyc11g020510.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-21 105.5 55 92.7
Solyc11g063690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.4e-21 104.8 55 90.9
Solyc11g019860.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.1e-21 104.0 55 90.9
Solyc11g020520.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.2e-21 102.8 55 90.9
PGSC0003DMG400041395 Solanum tuberosum HOM05D000613 ORTHO05D000446 9.2e-21 102.8 55 89.1
Solyc08g061680.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.0e-20 101.7 55 89.1
PGSC0003DMG400040064 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.5e-20 100.9 55 89.1
Solyc08g061695.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.7e-19 98.6 71 73.2
Solyc11g020420.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.7e-19 98.6 58 82.8
CAN.G719.2 Capsicum annuum HOM05D000613 ORTHO05D000446 3.9e-19 97.4 55 83.6
PGSC0003DMG400038901 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.9e-19 97.4 55 85.5
Solyc11g061920.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-18 95.9 47 95.7
Solyc11g028210.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.9e-18 95.1 55 81.8
PGSC0003DMG400043528 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.9e-18 95.1 76 65.8
Solyc08g061755.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.5e-18 94.7 87 60.9
Solyc11g020390.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.5e-18 94.7 47 95.7
Solyc08g061740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.3e-18 94.0 47 95.7
Solyc08g061780.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.6e-18 93.6 54 81.5
PGSC0003DMG400046352 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.8e-17 91.3 74 67.6
Solyc11g020370.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.2e-17 90.1 47 89.4
PGSC0003DMG400039644 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.2e-17 90.1 45 91.1
Solyc11g019880.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.1e-17 89.7 55 83.6
Solyc11g061900.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.1e-17 89.7 55 83.6
PGSC0003DMG400047106 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-16 89.0 74 63.5
Solyc11g020380.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.3e-16 88.2 55 81.8
PGSC0003DMG400038336 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.2e-16 87.0 84 58.3
PGSC0003DMG400042147 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.2e-16 87.0 106 50.0
PGSC0003DMG400038470 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.8e-16 86.7 74 63.5
Solyc11g061810.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-15 85.9 55 78.2
Nitab4.5_0008989g0060 Nicotiana tabacum HOM05D000613 ORTHO05D000446 2.6e-15 84.7 51 78.4
Solyc11g020400.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.4e-15 84.3 55 78.2
Solyc11g027933.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.4e-15 84.0 69 65.2
PGSC0003DMG400039977 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.9e-13 78.6 101 47.5
Solyc11g020360.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 55 74.5
PGSC0003DMG400039211 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.1e-13 76.6 107 44.9
PGSC0003DMG400041401 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.2e-12 75.9 55 70.9
Solyc11g020500.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.6e-12 75.5 55 72.7
PGSC0003DMG400042401 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-12 75.1 118 40.7
Solyc08g061690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.7e-12 74.7 55 70.9
Solyc11g018855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 140 37.9
Solyc11g020430.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 47 78.7
Solyc11g150108.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 140 37.9
Solyc11g150109.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 140 37.9
Sopen11g009990 Solanum pennellii HOM05D000613 ORTHO05D000446 3.5e-12 74.3 140 37.9
Sopen11g023910 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-12 73.6 140 37.9
Sopen11g010000 Solanum pennellii HOM05D000613 ORTHO05D000446 7.8e-12 73.2 140 37.1
Solyc11g020365.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 79 53.2
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 140 37.1
PGSC0003DMG400038521 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 140 37.1
PGSC0003DMG400044956 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 140 37.1
Nitab4.5_0011558g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 2.3e-11 71.6 113 39.8
PGSC0003DMG400040479 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.0e-11 71.2 140 37.1
PGSC0003DMG400044260 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.0e-11 71.2 140 36.4
Actinidia23473 Actinidia chinensis HOM05D000613 ORTHO05D000446 1.5e-10 68.9 80 48.8
GSVIVG01011107001 Vitis vinifera HOM05D000613 ORTHO05D000446 1.9e-10 68.6 88 43.2
PGSC0003DMG400034473 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.6e-10 67.0 99 42.4
PGSC0003DMG400046752 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.3e-10 66.6 140 35.0
PGSC0003DMG400035908 Solanum tuberosum HOM05D007862 ORTHO05D000446 1.2e-09 65.9 140 35.0
PGSC0003DMG400035835 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-09 65.1 140 35.0
PGSC0003DMG400035440 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.6e-09 64.3 140 34.3
Sopen04g016170 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-09 63.9 44 70.5
Sopen00g005920 Solanum pennellii HOM05D000613 ORTHO05D000446 8.1e-09 63.2 140 35.0
PGSC0003DMG400010282 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.1e-08 62.8 44 68.2
PGSC0003DMG400042932 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.1e-08 62.8 140 32.9
Solyc11g020507.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-08 62.4 138 34.8
PGSC0003DMG400026805 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-08 61.6 44 65.9
PGSC0003DMG400038123 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-08 61.6 44 70.5
PGSC0003DMG400043900 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.1e-08 61.2 44 68.2
Solyc08g061790.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.2e-08 60.5 34 85.3
PGSC0003DMG400040894 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.2e-08 60.5 44 65.9
PGSC0003DMG400045315 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.8e-08 60.1 56 60.7
Solyc11g061910.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.9e-08 59.7 29 93.1
PGSC0003DMG400036132 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.9e-08 59.7 31 87.1
Solyc11g061855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-07 59.3 28 96.4
Sopen11g023710 Solanum pennellii HOM05D000613 ORTHO05D000002 1.2e-07 59.3 28 96.4
Sopen11g023930 Solanum pennellii HOM05D000613 ORTHO05D000446 1.2e-07 59.3 28 96.4
Peaxi162Scf00016g00911 Petunia axillaris HOM05D000613 ORTHO05D000446 1.5e-07 58.9 140 32.1
Peaxi162Scf00016g00945 Petunia axillaris HOM05D000613 ORTHO05D000446 1.5e-07 58.9 140 32.1
PGSC0003DMG400038422 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 28 96.4
PGSC0003DMG400040842 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 28 96.4
PGSC0003DMG400043341 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 44 61.4
CAN.G133.4 Capsicum annuum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 56 55.4
Sopen11g012830 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-07 58.2 40 67.5
PGSC0003DMG400045199 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 44 61.4
Solyc11g061790.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 29 89.7
Sopen11g023700 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-07 57.8 28 92.9
PGSC0003DMG400046681 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 44 63.6
PGSC0003DMG400041074 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 44 61.4
Thecc.04G221200 Theobroma cacao HOM05D000613 ORTHO05D000446 4.4e-07 57.4 114 33.3
PGSC0003DMG400034593 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-07 57.0 44 61.4
PGSC0003DMG400036280 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-07 57.0 32 78.1
PGSC0003DMG400040027 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-07 57.0 31 83.9
PGSC0003DMG400046917 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-07 57.0 27 96.3
Lsat_1_v5_gn_4_15981 Lactuca sativa HOM05D000613 ORTHO05D000446 7.6e-07 56.6 60 46.7
Peaxi162Scf00209g00126 Petunia axillaris HOM05D000613 ORTHO05D000446 7.6e-07 56.6 140 31.4
PGSC0003DMG400036656 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.6e-07 56.6 44 63.6
PGSC0003DMG400045451 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-06 55.8 27 92.6
PGSC0003DMG400046627 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-06 55.8 44 65.9
PGSC0003DMG400036951 Solanum tuberosum HOM05D000613 ORTHO05D018136 1.7e-06 55.5 36 69.4
PGSC0003DMG400034585 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.2e-06 55.1 28 89.3
PGSC0003DMG400037891 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.2e-06 55.1 28 89.3
PGSC0003DMG400043272 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.2e-06 55.1 96 38.5
PGSC0003DMG400037166 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.9e-06 54.7 28 89.3
PGSC0003DMG400039457 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.9e-06 54.7 44 63.6
Aqoxy4G00843 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 3.7e-06 54.3 140 27.9
ECA236G0106 Erigeron canadensis HOM05D000613 ORTHO05D000446 3.7e-06 54.3 46 58.7
Dinv32954 Davidia involucrata HOM05D000613 ORTHO05D000446 4.9e-06 53.9 44 61.4
Psat3g125240 Pisum sativum HOM05D000613 ORTHO05D000446 4.9e-06 53.9 101 32.7
PGSC0003DMG400037610 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.9e-06 53.9 32 75.0
Aqoxy4G00845 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 6.4e-06 53.5 28 82.1
Gohir.A08G222900 Gossypium hirsutum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 51 49.0
Nn4g26190 Nelumbo nucifera HOM05D000613 ORTHO05D000446 6.4e-06 53.5 44 56.8
Nitab4.5_0008989g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 44 59.1
Nitab4.5_0011417g0040 Nicotiana tabacum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 44 63.6
PGSC0003DMG400036530 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 28 85.7
PGSC0003DMG400045976 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 28 89.3
Peaxi162Scf02530g00001 Petunia axillaris HOM05D000613 ORTHO05D000446 8.4e-06 53.1 44 59.1
TAR636G2979 Trochodendron aralioides HOM05D000613 ORTHO05D000446 8.4e-06 53.1 44 61.4


User provided reference genes

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