Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g060960.1 Solanum lycopersicum HOM05D001119 ORTHO05D000862 7.3e-86 320.5 157 100.0
Peaxi162Scf00073g00122 Petunia axillaris HOM05D001119 ORTHO05D000862 7.5e-30 134.4 166 52.4
Nitab4.5_0002831g0010 Nicotiana tabacum HOM05D001119 ORTHO05D000862 2.8e-29 132.5 248 37.5
Nitab4.5_0000209g0080 Nicotiana tabacum HOM05D001119 ORTHO05D000862 1.4e-28 130.2 248 37.5
Nitab4.5_0000268g0010 Nicotiana tabacum HOM05D001119 ORTHO05D000862 6.8e-23 111.3 165 48.5
Nitab4.5_0000447g0030 Nicotiana tabacum HOM05D001119 ORTHO05D000862 5.7e-22 108.2 161 47.2
Dinv30150 Davidia involucrata HOM05D001119 ORTHO05D000862 3.5e-19 99.0 111 54.1
Cc08_g00820 Coffea canephora HOM05D001119 ORTHO05D000862 2.3e-18 96.3 123 46.3
Nitab4.5_0004331g0010 Nicotiana tabacum HOM05D001119 ORTHO05D000862 6.5e-18 94.7 74 58.1
Ciclev10003740m.g Citrus clementina HOM05D001119 ORTHO05D000862 8.0e-16 87.8 126 38.9
Oeu042687.1 Olea europaea HOM05D001119 ORTHO05D000862 8.0e-16 87.8 125 45.6
Cpa.g.sc259.9 Carica papaya HOM05D001119 ORTHO05D000862 2.6e-14 82.8 128 41.4
Potri.006G252800 Populus trichocarpa HOM05D001119 ORTHO05D000862 2.6e-14 82.8 126 42.1
Rhsim02G0199400 Rhododendron simsii HOM05D001119 ORTHO05D000862 4.4e-14 82.0 125 42.4
Sabra06G0197600 Salix brachista HOM05D001119 ORTHO05D000862 4.4e-14 82.0 126 42.1
PGR044G2085 Punica granatum HOM05D001119 ORTHO05D000862 1.3e-13 80.5 112 41.1
vmacro11157 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 4.9e-13 78.6 126 43.7
Actinidia22353 Actinidia chinensis HOM05D001119 ORTHO05D000862 6.3e-13 78.2 119 42.9
AUR62026866 Chenopodium quinoa HOM05D001119 ORTHO05D000862 8.3e-13 77.8 128 38.3
QL02p021952 Quercus lobata HOM05D001119 ORTHO05D000862 1.1e-12 77.4 124 40.3
Thecc.09G026700 Theobroma cacao HOM05D001119 ORTHO05D000862 1.8e-12 76.6 110 38.2
Duzib168G2357 Durio zibethinus HOM05D001119 ORTHO05D000862 3.1e-12 75.9 126 35.7
Gohir.D07G031700 Gossypium hirsutum HOM05D001119 ORTHO05D000862 5.4e-12 75.1 126 35.7
Gorai.001G033100 Gossypium raimondii HOM05D001119 ORTHO05D000862 5.4e-12 75.1 126 35.7
Gohir.A07G027700 Gossypium hirsutum HOM05D001119 ORTHO05D000862 9.2e-12 74.3 126 35.7
CiPaw.07G222000 Carya illinoinensis HOM05D001119 ORTHO05D000862 1.6e-11 73.6 129 38.8
Manes.16G121000 Manihot esculenta HOM05D001119 ORTHO05D000862 1.6e-11 73.6 128 38.3
Cpa.g.sc259.8 Carica papaya HOM05D001119 ORTHO05D000862 2.0e-11 73.2 128 39.8
Atru.chr7.2408 Acer truncatum HOM05D001119 ORTHO05D000862 3.5e-11 72.4 120 37.5
COL.COLO4_18841 Corchorus olitorius HOM05D001119 ORTHO05D000862 3.5e-11 72.4 109 39.4
ClCG08G013300 Citrullus lanatus HOM05D001119 ORTHO05D000862 4.5e-11 72.0 126 38.9
THA.LOC104815016 Tarenaya hassleriana HOM05D001119 ORTHO05D000862 5.9e-11 71.6 114 36.0
MELO3C011255.2 Cucumis melo HOM05D001119 ORTHO05D000862 7.8e-11 71.2 123 39.8
CsaV3_2G032020 Cucumis sativus L. HOM05D001119 ORTHO05D000862 7.8e-11 71.2 123 39.8
Prupe.1G479500 Prunus persica HOM05D001119 ORTHO05D000862 1.0e-10 70.9 113 40.7
Lalb_Chr23g0268591 Lupinus albus HOM05D001119 ORTHO05D000862 1.3e-10 70.5 135 36.3
FvH4_2g29280 Fragaria vesca HOM05D001119 ORTHO05D000862 1.7e-10 70.1 107 40.2
FAN24G2681 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.7e-10 70.1 107 40.2
FAN27G2031 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.7e-10 70.1 107 40.2
FAN15G0351 Fragaria x ananassa HOM05D001119 ORTHO05D000862 2.3e-10 69.7 107 40.2
EL10Ac2g04242 Beta vulgaris HOM05D001119 ORTHO05D000862 3.8e-10 68.9 131 34.4
RcHm_v2.0_Chr6g0298091 Rosa chinensis HOM05D001119 ORTHO05D000862 5.0e-10 68.6 110 38.2
Sp7g07430 Schrenkiella parvula HOM05D001119 ORTHO05D000862 5.0e-10 68.6 127 36.2
Lj4g0025779 Lotus japonicus HOM05D001119 ORTHO05D000862 8.6e-10 67.8 109 34.9
Sp7g06000 Schrenkiella parvula HOM05D001119 ORTHO05D000862 1.1e-09 67.4 126 38.9
Ah.16g104350 Amaranthus hybridus HOM05D001119 ORTHO05D000862 1.5e-09 67.0 128 33.6
Glyma.20G021800 Glycine max HOM05D001119 ORTHO05D000862 2.5e-09 66.2 106 35.8
Lalb_Chr08g0244021 Lupinus albus HOM05D001119 ORTHO05D000862 4.3e-09 65.5 169 30.8
Sc23g0006850 Simmondsia chinensis HOM05D001119 ORTHO05D000862 4.3e-09 65.5 128 35.2
Glyma.06G064300 Glycine max HOM05D001119 ORTHO05D000862 7.3e-09 64.7 127 34.6
VMungo0251G2913 Vigna mungo HOM05D001119 ORTHO05D000862 7.3e-09 64.7 111 34.2
Medtr4g083770 Medicago truncatula HOM05D001119 ORTHO05D000862 9.5e-09 64.3 109 34.9
AT3G45200 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 2.1e-08 63.2 127 33.9
Thhalv10005525m.g Eutrema salsugineum HOM05D001119 ORTHO05D000862 2.1e-08 63.2 118 36.4
Psat4g098760 Pisum sativum HOM05D001119 ORTHO05D000862 2.8e-08 62.8 128 35.2
BcaB02g08041 Brassica carinata HOM05D001119 ORTHO05D000862 3.6e-08 62.4 143 36.4
Cfa013160 Carpinus fangiana HOM05D001119 ORTHO05D000862 4.7e-08 62.0 101 39.6
Phvul.002G099200 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 6.1e-08 61.6 109 35.8
Thhalv10005652m.g Eutrema salsugineum HOM05D001119 ORTHO05D000862 1.0e-07 60.8 135 32.6
Medtr3g107400 Medicago truncatula HOM05D001119 ORTHO05D000862 1.0e-07 60.8 136 33.8
Thhalv10015649m.g Eutrema salsugineum HOM05D001119 ORTHO05D000862 1.8e-07 60.1 122 33.6
FAN20G1116 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.8e-07 60.1 109 36.7
AT1G64870 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 2.3e-07 59.7 130 33.8
Atru.chr7.2286 Acer truncatum HOM05D001119 ORTHO05D000862 3.0e-07 59.3 113 36.3
Atru.chr7.2406 Acer truncatum HOM05D001119 ORTHO05D000862 3.0e-07 59.3 113 36.3
CARHR128090 Cardamine hirsuta HOM05D001119 ORTHO05D000862 4.0e-07 58.9 183 27.9
A05p16370 Brassica napus HOM05D001119 ORTHO05D000862 5.2e-07 58.5 142 33.1
BraA05t20545Z Brassica rapa HOM05D001119 ORTHO05D000862 5.2e-07 58.5 142 33.1
arahy.Tifrunner.gnm1.ann1.NT92JM Arachis hypogaea HOM05D001119 ORTHO05D000862 6.8e-07 58.2 113 35.4
Carub.0005s1099 Capsella rubella HOM05D001119 ORTHO05D000862 6.8e-07 58.2 118 32.2
AT5G11220 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 8.9e-07 57.8 134 32.1
BcaC08g44325 Brassica carinata HOM05D001119 ORTHO05D000862 8.9e-07 57.8 126 34.1
C06p17500 Brassica napus HOM05D001119 ORTHO05D000862 8.9e-07 57.8 126 34.1
BolC6t36944H Brassica oleracea HOM05D001119 ORTHO05D000862 8.9e-07 57.8 126 34.1
Ca_18771_v3 Cicer arietinum L. HOM05D001119 ORTHO05D000862 8.9e-07 57.8 112 35.7
Cc09_g02590 Coffea canephora HOM05D001119 ORTHO05D000862 8.9e-07 57.8 100 32.0
A05p16390 Brassica napus HOM05D001119 ORTHO05D000862 1.5e-06 57.0 142 34.5
BraA05t20547Z Brassica rapa HOM05D001119 ORTHO05D000862 1.5e-06 57.0 142 34.5
CARHR288970 Cardamine hirsuta HOM05D001119 ORTHO05D000862 1.5e-06 57.0 147 32.0
Nn2g10643 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.5e-06 57.0 80 36.2
arahy.Tifrunner.gnm1.ann1.TW4QJ7 Arachis hypogaea HOM05D001119 ORTHO05D000862 2.0e-06 56.6 113 35.4
Lj4g0006473 Lotus japonicus HOM05D001119 ORTHO05D000862 2.0e-06 56.6 107 37.4
SalBow3G1965 Salvia bowleyana HOM05D001119 ORTHO05D000862 2.0e-06 56.6 128 33.6
arahy.Tifrunner.gnm1.ann1.4KY2C7 Arachis hypogaea HOM05D001119 ORTHO05D000862 2.6e-06 56.2 113 35.4
MD08G1149000 Malus domestica HOM05D001119 ORTHO05D000862 2.6e-06 56.2 109 33.9
C07p05470 Brassica napus HOM05D001119 ORTHO05D000862 3.4e-06 55.8 145 34.5
BolC7t40947H Brassica oleracea HOM05D001119 ORTHO05D000862 3.4e-06 55.8 145 34.5
BraA06t25334Z Brassica rapa HOM05D001119 ORTHO05D000862 3.4e-06 55.8 145 33.1
A07p03190 Brassica napus HOM05D001119 ORTHO05D000862 4.4e-06 55.5 145 34.5
BraA07t28116Z Brassica rapa HOM05D001119 ORTHO05D000862 4.4e-06 55.5 145 34.5
Oeu017236.1 Olea europaea HOM05D001119 ORTHO05D000862 4.4e-06 55.5 116 31.9
AL5G23730 Arabidopsis lyrata HOM05D001119 ORTHO05D000862 5.8e-06 55.1 146 32.2
BcaC06g36315 Brassica carinata HOM05D001119 ORTHO05D000862 5.8e-06 55.1 145 34.5
C09p12070 Brassica napus HOM05D001119 ORTHO05D000862 5.8e-06 55.1 148 32.4
ClCG09G020410 Citrullus lanatus HOM05D001119 ORTHO05D000862 5.8e-06 55.1 60 41.7
TPR.G20994 Trifolium pratense HOM05D001119 ORTHO05D000862 5.8e-06 55.1 115 33.9
TPR.G7180 Trifolium pratense HOM05D001119 ORTHO05D000862 5.8e-06 55.1 133 33.1
A06p22600 Brassica napus HOM05D001119 ORTHO05D000862 7.5e-06 54.7 145 33.1
Sed0006454 Sechium edule HOM05D001119 ORTHO05D000862 7.5e-06 54.7 60 41.7
Sc18g0002540 Simmondsia chinensis HOM05D001119 ORTHO05D000862 7.5e-06 54.7 60 43.3
Migut.F01793 Erythranthe guttata HOM05D001119 ORTHO05D000862 9.8e-06 54.3 60 43.3
Psat7g131800 Pisum sativum HOM05D001119 ORTHO05D000862 9.8e-06 54.3 111 35.1


User provided reference genes

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