Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g048507.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 2.9e-293 1011.1 509 100.0
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 3.8e-277 957.6 561 88.2
Solyc07g041820.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 5.6e-244 847.4 587 77.0
Solyc09g150135.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 7.6e-233 810.4 484 86.6
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 1.7e-224 782.7 551 76.4
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 7.1e-215 750.7 493 81.7
Sopen11g011100 Solanum pennellii HOM05D010988 ORTHO05D000137 9.1e-194 680.6 472 77.8
Solyc12g017670.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 4.7e-190 668.3 465 77.6
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-172 607.4 345 89.0
Sopen07g022280 Solanum pennellii HOM05D010988 ORTHO05D000137 3.7e-163 578.9 382 80.6
Solyc12g150127.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 2.4e-162 576.2 300 95.7
Sopen05g023260 Solanum pennellii HOM05D010988 ORTHO05D000137 3.7e-139 499.2 333 80.5
Sopen06g011950 Solanum pennellii HOM05D010988 ORTHO05D000137 4.6e-105 386.0 306 70.9
Solyc10g050895.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 2.9e-99 366.7 311 65.6
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.0e-63 247.7 278 52.2
Solyc10g150119.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 6.8e-56 222.6 222 59.9
PGSC0003DMG400011084 Solanum tuberosum HOM05D010988 ORTHO05D000137 1.2e-49 201.8 211 58.3
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.1e-34 152.1 529 30.2
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 1.6e-17 95.1 182 33.0
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 8.1e-17 92.8 182 32.4
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 3.1e-16 90.9 182 31.9
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.9e-16 89.4 140 34.3
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 2.0e-15 88.2 548 23.7
Sopen06g005890 Solanum pennellii HOM05D010988 ORTHO05D000137 2.9e-14 84.3 174 35.1
Nitab4.5_0005195g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.7e-14 84.0 108 37.0
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 6.4e-14 83.2 388 23.5
Sopen06g003810 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-13 82.0 158 32.3
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-13 81.6 531 24.5
Nitab4.5_0000476g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.2e-13 79.3 150 30.0
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 9.2e-13 79.3 447 24.8
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-12 78.6 156 30.8
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 1.6e-12 78.6 137 35.8
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-12 77.4 149 30.9
PGSC0003DMG400042934 Solanum tuberosum HOM05D010988 ORTHO05D000034 4.6e-12 77.0 62 61.3
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-11 75.9 153 30.7
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.3e-11 74.7 354 22.3
Nitab4.5_0003730g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.1e-11 73.6 411 23.8
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.1e-11 73.6 407 23.8
Nitab4.5_0004037g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-10 72.4 252 25.0
Nitab4.5_0000056g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.9e-10 71.6 163 28.2
Nitab4.5_0001499g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-10 71.2 57 49.1
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-10 71.2 155 27.7
Nitab4.5_0011352g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-10 71.2 416 23.1
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-10 71.2 70 45.7
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 5.6e-10 70.1 103 35.0
Nitab4.5_0001146g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.6e-10 69.3 72 40.3
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-09 68.2 139 29.5
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-09 67.8 356 26.1
Nitab4.5_0004557g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-09 67.8 159 30.8
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.8e-09 67.8 68 39.7
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.6e-09 67.4 517 22.4
Nitab4.5_0004553g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.7e-09 67.0 153 30.7
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 4.7e-09 67.0 70 44.3
Nitab4.5_0001446g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.1e-09 66.2 333 22.5
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 8.1e-09 66.2 70 41.4
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-08 65.5 64 40.6
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.8e-08 65.1 170 25.9
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.0e-08 63.9 131 27.5
Nitab4.5_0010825g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.0e-08 63.9 74 40.5
Nitab4.5_0004979g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.2e-08 63.5 174 25.9
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 63.5 365 23.0
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.8e-08 63.2 169 26.6
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-07 62.0 69 40.6
Sopen00g005360 Solanum pennellii HOM05D000541 ORTHO05D000137 2.6e-07 61.2 72 36.1
Nitab4.5_0002005g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.4e-07 60.8 365 21.4
Sopen04g026570 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-07 60.8 65 41.5
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 3.4e-07 60.8 140 30.7
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-07 60.5 164 27.4
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-07 60.5 164 27.4
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-07 60.5 164 27.4
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-07 60.5 164 27.4
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.3e-06 58.9 231 25.1
PGSC0003DMG400037440 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.3e-06 58.9 69 40.6
Nitab4.5_0000028g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-06 58.2 200 28.5
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 2.9e-06 57.8 140 30.0
Nitab4.5_0006248g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.8e-06 57.4 57 42.1
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.9e-06 57.0 420 21.9
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.4e-06 56.6 343 23.0


User provided reference genes

Program Settings