Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.2e-74 283.1 140 100.0
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.6e-42 175.6 116 77.6
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 2.8e-36 155.6 115 70.4
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 6.2e-36 154.5 115 69.6
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-35 152.9 115 68.7
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.5e-34 149.8 115 67.8
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 4.5e-34 148.3 115 67.8
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 5.8e-34 147.9 116 65.5
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 7.6e-34 147.5 115 67.0
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.0e-30 137.1 115 61.7
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 6.7e-30 134.4 115 59.1
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 1.1e-29 133.7 134 51.5
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.1e-29 133.7 115 60.0
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.1e-29 133.7 114 59.6
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.5e-29 132.5 115 58.3
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 3.3e-29 132.1 115 59.1
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 5.6e-29 131.3 115 58.3
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 2.1e-28 129.4 115 58.3
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.8e-28 129.0 115 57.4
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.8e-28 129.0 115 57.4
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.8e-28 129.0 136 50.7
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.6e-28 128.6 115 58.3
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 3.6e-28 128.6 115 58.3
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.2e-28 127.9 115 57.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 8.1e-28 127.5 136 50.0
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 8.1e-28 127.5 136 50.0
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 8.1e-28 127.5 115 57.4
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 8.1e-28 127.5 115 57.4
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 8.1e-28 127.5 136 50.0
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.1e-27 127.1 115 56.5
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.1e-27 127.1 136 50.0
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.4e-27 126.7 115 54.8
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.8e-27 126.3 115 55.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 6.9e-27 124.4 115 57.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 9.0e-27 124.0 115 57.4
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 9.0e-27 124.0 116 55.2
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 9.0e-27 124.0 115 56.5
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.2e-26 123.6 115 55.7
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.2e-26 123.6 115 57.4
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 1.2e-26 123.6 115 56.5
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.2e-26 123.6 115 56.5
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 2.6e-26 122.5 115 55.7
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 2.6e-26 122.5 116 52.6
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.4e-26 122.1 115 55.7
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.5e-26 121.7 115 53.9
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 4.5e-26 121.7 115 53.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 4.5e-26 121.7 115 53.9
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.5e-26 121.7 115 53.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 5.8e-26 121.3 136 48.5
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 7.6e-26 120.9 136 47.1
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 9.9e-26 120.6 115 53.9
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 9.9e-26 120.6 115 54.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.7e-25 119.8 135 46.7
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.2e-25 119.4 115 53.0
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 2.2e-25 119.4 115 53.9
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.2e-25 119.4 136 46.3
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 2.9e-25 119.0 115 53.0
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 2.9e-25 119.0 115 53.0
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.9e-25 119.0 115 53.0
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.9e-25 119.0 115 53.0
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 3.8e-25 118.6 115 52.2
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 3.8e-25 118.6 115 53.0
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 3.8e-25 118.6 115 54.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.9e-25 118.2 115 53.0
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 6.4e-25 117.9 115 53.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 6.4e-25 117.9 115 53.0
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 6.4e-25 117.9 116 52.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.9e-24 116.3 115 52.2
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.9e-24 116.3 115 53.0
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.9e-24 116.3 116 51.7
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.4e-24 115.9 136 44.9
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 4.2e-24 115.2 115 53.0
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 4.2e-24 115.2 115 53.0
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 4.2e-24 115.2 115 50.4
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.2e-23 113.6 115 48.7
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.1e-23 112.8 136 43.4
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 2.7e-23 112.5 136 43.4
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 2.7e-23 112.5 116 49.1
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.0e-22 110.5 116 48.3
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.0e-22 110.5 136 42.6
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.0e-22 110.5 115 48.7
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.3e-22 110.2 136 41.9
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.0e-22 109.0 115 48.7
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.9e-22 108.6 115 47.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 3.9e-22 108.6 116 46.6
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 3.9e-22 108.6 116 46.6
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 3.9e-22 108.6 115 47.8
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 5.1e-22 108.2 115 47.8
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 6.7e-22 107.8 115 47.8
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 8.7e-22 107.5 115 47.0
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 8.7e-22 107.5 115 47.0
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.6e-21 104.8 104 51.9
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.6e-20 103.2 116 50.9
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.8e-20 102.4 116 45.7
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.1e-20 100.9 98 53.1
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 3.1e-19 99.0 115 48.7
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.0e-19 97.4 98 51.0
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.3e-17 93.6 116 40.5
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.1e-16 90.5 98 48.0
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 7.9e-15 84.3 110 45.5
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.3e-14 83.6 115 40.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 3.9e-14 82.0 115 38.3
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 6.7e-14 81.3 115 37.4
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.1e-13 80.5 114 38.6
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.5e-13 80.1 117 41.9
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.7e-13 78.2 115 38.3
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.7e-13 78.2 115 38.3
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.2e-12 74.3 116 35.3
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-11 72.4 104 40.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.1e-08 63.9 78 43.6
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.5e-08 62.8 58 55.2
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 5.5e-08 61.6 118 28.0
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.6e-07 58.9 55 52.7
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 2.3e-06 56.2 77 37.7


User provided reference genes

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