Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g044440.1 Solanum lycopersicum HOM05D000570 ORTHO05D391710 1.7e-42 175.6 90 100.0
CAN.G996.11 Capsicum annuum HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
Nitab4.5_0003018g0110 Nicotiana tabacum HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
Nitab4.5_0014079g0010 Nicotiana tabacum HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
Solyc07g054500.4 Solanum lycopersicum HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
Sopen07g028440 Solanum pennellii HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
PGSC0003DMG400018367 Solanum tuberosum HOM05D000570 ORTHO05D002740 4.6e-08 61.2 38 76.3
THA.LOC104826026 Tarenaya hassleriana HOM05D000570 ORTHO05D002740 2.3e-07 58.9 76 47.4
CAN.G1881.2 Capsicum annuum HOM05D000570 ORTHO05D002740 3.9e-07 58.2 38 71.1
Peaxi162Scf00007g02852 Petunia axillaris HOM05D000570 ORTHO05D002740 5.1e-07 57.8 38 71.1
Nitab4.5_0002473g0060 Nicotiana tabacum HOM05D000570 ORTHO05D002740 6.6e-07 57.4 38 68.4
Solyc12g010740.3 Solanum lycopersicum HOM05D000570 ORTHO05D002740 6.6e-07 57.4 38 68.4
Sopen12g005260 Solanum pennellii HOM05D000570 ORTHO05D002740 6.6e-07 57.4 38 68.4
PGSC0003DMG400007862 Solanum tuberosum HOM05D000570 ORTHO05D002740 6.6e-07 57.4 38 68.4
Peaxi162Scf00485g00210 Petunia axillaris HOM05D000570 ORTHO05D002740 1.9e-06 55.8 38 68.4
Cc05_g06630 Coffea canephora HOM05D000570 ORTHO05D002740 2.5e-06 55.5 38 65.8
Sc12g0002790 Simmondsia chinensis HOM05D000570 ORTHO05D002740 2.5e-06 55.5 38 65.8
Oeu041292.1 Olea europaea HOM05D000570 ORTHO05D002740 3.3e-06 55.1 38 63.2
Rhsim06G0149400 Rhododendron simsii HOM05D000570 ORTHO05D002740 3.3e-06 55.1 75 46.7
Sp3g34100 Schrenkiella parvula HOM05D000570 ORTHO05D002740 3.3e-06 55.1 38 68.4
EL10Ac9g20683 Beta vulgaris HOM05D000570 ORTHO05D002740 4.3e-06 54.7 38 65.8
Migut.H01044 Erythranthe guttata HOM05D000570 ORTHO05D002740 4.3e-06 54.7 38 65.8
SGA_v2.0_scaffold261G45903 Striga asiatica HOM05D000570 ORTHO05D002740 4.3e-06 54.7 38 65.8
BcaB01g01951 Brassica carinata HOM05D000570 ORTHO05D002740 7.3e-06 53.9 76 44.7
Ciclev10014768m.g Citrus clementina HOM05D000570 ORTHO05D002740 7.3e-06 53.9 76 44.7
Dinv23693 Davidia involucrata HOM05D000570 ORTHO05D002740 7.3e-06 53.9 76 44.7
FAN05G2120 Fragaria x ananassa HOM05D000570 ORTHO05D002740 7.3e-06 53.9 76 44.7
FAN09G3013 Fragaria x ananassa HOM05D002479 ORTHO05D002675 7.3e-06 53.9 76 44.7
Actinidia09889 Actinidia chinensis HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7
Ah.01g015290 Amaranthus hybridus HOM05D000570 ORTHO05D012963 9.6e-06 53.5 38 63.2
CARHR251780 Cardamine hirsuta HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7
FvH4_6g44950 Fragaria vesca HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7
FAN14G1217 Fragaria x ananassa HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7
Hma1.2p1_0875F.1_g231550 Hydrangea macrophylla HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7
vmacro12269 Vaccinium macrocarpon HOM05D000570 ORTHO05D002740 9.6e-06 53.5 76 44.7


User provided reference genes

Program Settings