Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 3.5e-58 228.0 112 100.0
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.6e-47 192.6 95 97.9
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 3.4e-45 184.9 95 91.6
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 8.5e-44 180.3 95 88.4
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 3.0e-41 171.8 95 82.1
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.5e-40 169.5 89 86.5
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 1.9e-40 169.1 95 82.1
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 2.5e-40 168.7 95 83.2
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 2.8e-39 165.2 95 83.2
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.8e-39 165.2 96 80.2
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.8e-39 165.2 96 80.2
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 4.8e-39 164.5 95 78.9
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 8.2e-39 163.7 96 79.2
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 1.4e-38 162.9 96 78.1
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.4e-38 162.9 95 81.1
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.4e-38 162.9 95 81.1
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 1.4e-38 162.9 96 77.1
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 2.4e-38 162.2 95 76.8
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 4.1e-38 161.4 95 80.0
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 5.3e-38 161.0 96 76.0
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 6.9e-38 160.6 96 74.0
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 9.1e-38 160.2 96 77.1
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.2e-37 159.8 96 78.1
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 2.6e-37 158.7 96 72.9
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 3.4e-37 158.3 95 78.9
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 4.5e-37 157.9 109 67.0
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 7.7e-37 157.1 96 75.0
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 7.7e-37 157.1 96 75.0
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 1.0e-36 156.8 96 77.1
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 1.0e-36 156.8 96 77.1
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.3e-36 156.4 96 76.0
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 1.3e-36 156.4 96 76.0
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 2.2e-36 155.6 96 77.1
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 2.9e-36 155.2 96 72.9
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 3.8e-36 154.8 96 75.0
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 3.8e-36 154.8 96 75.0
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 3.8e-36 154.8 96 74.0
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 3.8e-36 154.8 96 72.9
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 5.0e-36 154.5 96 70.8
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 5.0e-36 154.5 96 72.9
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 8.5e-36 153.7 96 74.0
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 1.4e-35 152.9 92 78.3
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 3.2e-35 151.8 96 75.0
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 4.2e-35 151.4 97 73.2
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 5.5e-35 151.0 96 71.9
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 7.2e-35 150.6 96 71.9
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 9.4e-35 150.2 96 72.9
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 1.2e-34 149.8 96 69.8
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 2.1e-34 149.1 96 71.9
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 2.7e-34 148.7 92 79.3
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 2.7e-34 148.7 91 78.0
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 3.6e-34 148.3 96 72.9
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 3.6e-34 148.3 96 72.9
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 3.6e-34 148.3 96 69.8
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.6e-34 148.3 91 78.0
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 3.6e-34 148.3 95 72.6
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 3.6e-34 148.3 106 66.0
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 4.7e-34 147.9 96 70.8
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 4.7e-34 147.9 91 78.0
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 6.1e-34 147.5 91 74.7
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.0e-33 146.7 96 70.8
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 1.0e-33 146.7 93 71.0
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 1.4e-33 146.4 90 76.7
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 1.8e-33 146.0 95 71.6
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 1.8e-33 146.0 96 70.8
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 2.3e-33 145.6 108 65.7
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 2.3e-33 145.6 96 70.8
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 3.0e-33 145.2 93 73.1
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 3.0e-33 145.2 96 74.0
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 3.9e-33 144.8 96 69.8
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 3.9e-33 144.8 96 69.8
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 5.1e-33 144.4 96 67.7
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 5.1e-33 144.4 96 67.7
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 5.1e-33 144.4 96 69.8
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 5.1e-33 144.4 96 67.7
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 5.1e-33 144.4 96 68.8
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 6.7e-33 144.1 96 69.8
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 6.7e-33 144.1 96 67.7
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 6.7e-33 144.1 96 69.8
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 6.7e-33 144.1 96 69.8
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 6.7e-33 144.1 96 67.7
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 8.8e-33 143.7 97 70.1
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 1.1e-32 143.3 96 69.8
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 1.5e-32 142.9 111 62.2
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 2.0e-32 142.5 97 70.1
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 2.0e-32 142.5 96 70.8
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 4.4e-32 141.4 111 64.0
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 4.4e-32 141.4 92 70.7
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 4.4e-32 141.4 96 70.8
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 9.7e-32 140.2 96 66.7
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 9.7e-32 140.2 99 68.7
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 9.7e-32 140.2 97 68.0
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.7e-31 139.4 96 64.6
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.7e-31 139.4 96 64.6
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 1.7e-31 139.4 111 64.0
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 6.3e-31 137.5 96 66.7
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.4e-30 136.3 90 71.1
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 4.5e-29 131.3 111 62.2
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 3.2e-27 125.2 82 67.1
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 4.7e-26 121.3 93 60.2
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 4.7e-26 121.3 96 61.5
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 1.4e-25 119.8 89 60.7
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 3.9e-25 118.2 96 54.2
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.5e-24 116.3 100 54.0
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 2.2e-23 112.5 89 58.4
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 1.6e-21 106.3 90 60.0
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 5.9e-21 104.4 90 60.0
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.7e-20 102.8 83 57.8
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.5e-19 99.8 85 57.6
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.2e-19 98.6 84 57.1
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 3.6e-18 95.1 75 61.3
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 2.0e-16 89.4 87 47.1
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 4.4e-16 88.2 96 42.7
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 9.1e-14 80.5 111 39.6
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 2.7e-10 68.9 84 45.2
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 4.4e-08 61.6 71 39.4
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 2.8e-07 58.9 81 34.6
Ciclev10020582m.g Citrus clementina HOM05D002050 ORTHO05D001949 1.8e-06 56.2 44 59.1


User provided reference genes

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