Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g044345.1 Solanum lycopersicum HOM05D007885 ORTHO05D010052 4.2e-34 147.5 78 100.0
Sopen08g013480 Solanum pennellii HOM05D007885 ORTHO05D010052 1.7e-30 135.6 78 93.6
CAN.G138.10 Capsicum annuum HOM05D007885 ORTHO05D010052 6.1e-25 117.1 73 86.3
PGSC0003DMG400025196 Solanum tuberosum HOM05D007885 ORTHO05D010052 7.5e-23 110.2 65 84.6
Rhsim07G0045900 Rhododendron simsii HOM05D007885 ORTHO05D010052 3.6e-17 91.3 76 61.8
Dinv43531 Davidia involucrata HOM05D007885 ORTHO05D010052 2.3e-16 88.6 85 56.5
TWI34G1949 Tripterygium wilfordii HOM05D007885 ORTHO05D010052 2.3e-16 88.6 60 71.7
Ciclev10033227m.g Citrus clementina HOM05D007885 ORTHO05D010052 3.0e-16 88.2 74 60.8
QL04p052580 Quercus lobata HOM05D007885 ORTHO05D010052 3.0e-16 88.2 60 70.0
Duzib177G0659 Durio zibethinus HOM05D007885 ORTHO05D010052 8.9e-16 86.7 77 58.4
GSVIVG01011323001 Vitis vinifera HOM05D007885 ORTHO05D010052 8.9e-16 86.7 75 60.0
Sc23g0004750 Simmondsia chinensis HOM05D007885 ORTHO05D010052 1.2e-15 86.3 80 56.2
Potri.013G072700 Populus trichocarpa HOM05D007885 ORTHO05D010052 2.0e-15 85.5 56 75.0
Thecc.05G232100 Theobroma cacao HOM05D007885 ORTHO05D010052 2.0e-15 85.5 77 58.4
Lj7A558G43 Lonicera japonica HOM05D007885 ORTHO05D010052 3.4e-15 84.7 83 59.0
Sed0017556 Sechium edule HOM05D007885 ORTHO05D010052 5.7e-15 84.0 77 57.1
Aqoxy3G02001 Aquilegia oxysepala HOM05D007885 ORTHO05D010052 7.5e-15 83.6 74 56.8
Dinv43976 Davidia involucrata HOM05D007885 ORTHO05D010052 7.5e-15 83.6 65 63.1
Migut.B01442 Erythranthe guttata HOM05D007885 ORTHO05D010052 7.5e-15 83.6 60 68.3
Lsat_1_v5_gn_3_26720 Lactuca sativa HOM05D007885 ORTHO05D010052 9.8e-15 83.2 64 62.5
Lalb_Chr18g0057781 Lupinus albus HOM05D007885 ORTHO05D010052 9.8e-15 83.2 56 71.4
Gohir.A13G081900 Gossypium hirsutum HOM05D007885 ORTHO05D010052 1.3e-14 82.8 76 59.2
Hma1.2p1_0353F.1_g133360 Hydrangea macrophylla HOM05D007885 ORTHO05D010052 1.3e-14 82.8 59 66.1
Lj6g0000644 Lotus japonicus HOM05D007885 ORTHO05D010052 1.7e-14 82.4 60 68.3
Manes.08G157500 Manihot esculenta HOM05D007885 ORTHO05D010052 1.7e-14 82.4 77 55.8
Peaxi162Scf01343g00147 Petunia axillaris HOM05D007885 ORTHO05D010052 2.2e-14 82.0 78 62.8
Actinidia05823 Actinidia chinensis HOM05D007885 ORTHO05D010052 2.9e-14 81.6 56 67.9
Gohir.D13G100200 Gossypium hirsutum HOM05D007885 ORTHO05D010052 4.9e-14 80.9 76 57.9
Sabra13G0062600 Salix brachista HOM05D007885 ORTHO05D010052 4.9e-14 80.9 59 69.5
Gorai.013G112400 Gossypium raimondii HOM05D007885 ORTHO05D010052 6.3e-14 80.5 75 53.3
Oeu026138.2 Olea europaea HOM05D007885 ORTHO05D010052 6.3e-14 80.5 57 70.2
ClCG06G008190 Citrullus lanatus HOM05D007885 ORTHO05D010052 8.3e-14 80.1 78 51.3
FvH4_7g07270 Fragaria vesca HOM05D007885 ORTHO05D010052 8.3e-14 80.1 71 59.2
HanXRQChr15g0465371 Helianthus annuus HOM05D007885 ORTHO05D010052 1.1e-13 79.7 65 58.5
arahy.Tifrunner.gnm1.ann1.4X2HTN Arachis hypogaea HOM05D007885 ORTHO05D010052 1.4e-13 79.3 70 58.6
MELO3C020379.2 Cucumis melo HOM05D007885 ORTHO05D010052 1.4e-13 79.3 77 53.2
CsaV3_2G010950 Cucumis sativus L. HOM05D007885 ORTHO05D010052 1.8e-13 79.0 78 52.6
ECA246G2713 Erigeron canadensis HOM05D007885 ORTHO05D010052 1.8e-13 79.0 61 62.3
Psat1g169600 Pisum sativum HOM05D007885 ORTHO05D010052 3.2e-13 78.2 60 65.0
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 4.1e-13 77.8 72 58.3
Ah.05g177170 Amaranthus hybridus HOM05D007885 ORTHO05D010052 7.0e-13 77.0 75 50.7
Glyma.15G127300 Glycine max HOM05D007885 ORTHO05D010052 7.0e-13 77.0 76 52.6
TAR629G0995 Trochodendron aralioides HOM05D007885 ORTHO05D010052 9.2e-13 76.6 72 51.4
Medtr2g029000 Medicago truncatula HOM05D007885 ORTHO05D010052 1.2e-12 76.3 64 60.9
AUR62038019 Chenopodium quinoa HOM05D007885 ORTHO05D010052 1.6e-12 75.9 76 55.3
Nn1g02087 Nelumbo nucifera HOM05D007885 ORTHO05D010052 2.0e-12 75.5 57 63.2
Phvul.006G131300 Phaseolus vulgaris HOM05D007885 ORTHO05D010052 2.0e-12 75.5 76 52.6
TPR.G17523 Trifolium pratense HOM05D007885 ORTHO05D010052 2.0e-12 75.5 59 62.7
Aa31LG9G17960 Aethionema arabicum HOM05D007885 ORTHO05D010052 5.9e-12 73.9 77 53.2
Cc02_g26380 Coffea canephora HOM05D007885 ORTHO05D010052 1.3e-11 72.8 57 63.2
MD07G1078800 Malus domestica HOM05D007885 ORTHO05D010052 2.3e-11 72.0 81 51.9
Zm00001eb306480 Zea mays HOM05D007885 ORTHO05D010052 3.9e-11 71.2 59 57.6
Sp1g36130 Schrenkiella parvula HOM05D007885 ORTHO05D010052 1.1e-10 69.7 76 50.0
HPP92_008354 Vanilla planifolia HOM05D007885 ORTHO05D010052 1.1e-10 69.7 77 50.6
CANSAT01G2257 Cannabis sativa HOM05D007885 ORTHO05D010052 1.9e-10 68.9 61 57.4
AT1G49245 Arabidopsis thaliana HOM05D007885 ORTHO05D010052 2.5e-10 68.6 75 52.0
C08p04310 Brassica napus HOM05D007885 ORTHO05D010052 2.5e-10 68.6 76 53.9
A08p04120 Brassica napus HOM05D007885 ORTHO05D010052 4.3e-10 67.8 76 52.6
BraA08t32437Z Brassica rapa HOM05D007885 ORTHO05D010052 4.3e-10 67.8 76 52.6
AL1G56120 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 5.6e-10 67.4 77 50.6
AL4G25080 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 5.6e-10 67.4 77 50.6
BcaC07g37071 Brassica carinata HOM05D007885 ORTHO05D010052 5.6e-10 67.4 76 52.6
CDE02G4204 Ceratophyllum demersum HOM05D007885 ORTHO05D010052 5.6e-10 67.4 77 45.5
Eucgr.E01767 Eucalyptus grandis HOM05D007885 ORTHO05D010052 5.6e-10 67.4 45 71.1
Carub.0001s3844 Capsella rubella HOM05D007885 ORTHO05D010052 3.6e-09 64.7 77 50.6
FvH4_7g07330 Fragaria vesca HOM05D007885 ORTHO05D010052 6.2e-09 63.9 45 68.9
vmacro13585 Vaccinium macrocarpon HOM05D007885 ORTHO05D010052 6.2e-09 63.9 114 40.4
BolC8t47235H Brassica oleracea HOM05D007885 ORTHO05D010052 8.0e-09 63.5 76 50.0
FAN01G2012 Fragaria x ananassa HOM05D007885 ORTHO05D010052 8.0e-09 63.5 56 60.7
PSO782G0684 Papaver somniferum HOM05D007885 ORTHO05D010052 1.4e-08 62.8 74 40.5
PSO063G1811 Papaver somniferum HOM05D007885 ORTHO05D010052 1.8e-08 62.4 74 40.5
RcHm_v2.0_Chr1g0337851 Rosa chinensis HOM05D007885 ORTHO05D010052 2.3e-08 62.0 46 65.2
BcaB04g17354 Brassica carinata HOM05D007885 ORTHO05D010052 4.0e-08 61.2 76 48.7
RcHm_v2.0_Chr0c29g0501081 Rosa chinensis HOM05D007885 ORTHO05D010052 6.8e-08 60.5 47 61.7
CARHR039250 Cardamine hirsuta HOM05D007885 ORTHO05D010052 1.2e-07 59.7 77 46.8
Thhalv10011900m.g Eutrema salsugineum HOM05D007885 ORTHO05D010052 1.5e-07 59.3 66 51.5


User provided reference genes

Program Settings