Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g042040.4 Solanum lycopersicum HOM05D006932 ORTHO05D014708 1.2e-107 393.3 203 100.0
Sopen08g012470 Solanum pennellii HOM05D006932 ORTHO05D009616 1.4e-105 386.3 203 98.0
PGSC0003DMG400000962 Solanum tuberosum HOM05D006932 ORTHO05D014708 1.9e-94 349.4 203 90.6
Nitab4.5_0000337g0050 Nicotiana tabacum HOM05D006932 ORTHO05D009616 9.3e-57 224.2 205 66.8
Nitab4.5_0003251g0090 Nicotiana tabacum HOM05D006932 ORTHO05D009616 1.5e-54 216.9 206 64.6
CAN.G6.34 Capsicum annuum HOM05D006932 ORTHO05D009616 2.4e-49 199.5 207 59.4
Peaxi162Scf00553g00219 Petunia axillaris HOM05D006932 ORTHO05D014708 2.7e-40 169.5 172 60.5
TAR628G0089 Trochodendron aralioides HOM05D006932 ORTHO05D009616 1.7e-13 80.5 191 36.1
Actinidia37937 Actinidia chinensis HOM05D006932 ORTHO05D009616 4.5e-11 72.4 131 41.2
GSVIVG01009937001 Vitis vinifera HOM05D006932 ORTHO05D014708 4.5e-11 72.4 72 54.2
FvH4_2g38240 Fragaria vesca HOM05D006932 ORTHO05D009616 7.7e-11 71.6 229 31.0
vmacro04363 Vaccinium macrocarpon HOM05D006932 ORTHO05D014708 1.3e-10 70.9 68 61.8
Lj4C22G4 Lonicera japonica HOM05D006932 ORTHO05D009616 2.2e-10 70.1 204 34.8
Nn5g30750 Nelumbo nucifera HOM05D006932 ORTHO05D009616 5.5e-09 65.5 158 32.3
FAN27G2636 Fragaria x ananassa HOM05D006932 ORTHO05D009616 7.2e-09 65.1 229 29.7
FAN15G2452 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.2e-08 64.3 234 30.8
FAN20G1755 Fragaria x ananassa HOM05D006932 ORTHO05D009616 1.6e-08 63.9 215 29.8
SalBow7G2156 Salvia bowleyana HOM05D006932 ORTHO05D009616 1.6e-08 63.9 66 54.5
PGR031G2736 Punica granatum HOM05D006932 ORTHO05D009616 2.7e-08 63.2 83 45.8
TWI56G1403 Tripterygium wilfordii HOM05D006932 ORTHO05D009616 2.7e-08 63.2 127 37.8
Prupe.1G363400 Prunus persica HOM05D006932 ORTHO05D009616 3.6e-08 62.8 59 57.6
Migut.C00855 Erythranthe guttata HOM05D006932 ORTHO05D009616 4.7e-08 62.4 205 31.2
RhsimUnG0065200 Rhododendron simsii HOM05D006932 ORTHO05D009616 6.1e-08 62.0 105 40.0
PSO170G2579 Papaver somniferum HOM05D006932 ORTHO05D009616 7.9e-08 61.6 81 42.0
RcHm_v2.0_Chr6g0303131 Rosa chinensis HOM05D006932 ORTHO05D009616 1.0e-07 61.2 186 30.6
MBI09_g14155_MAGBIO Magnolia biondii HOM05D025692 ORTHO05D014708 2.3e-07 60.1 139 33.8
MD08G1010800 Malus domestica HOM05D006932 ORTHO05D009616 3.0e-07 59.7 62 54.8
PSO700G0201 Papaver somniferum HOM05D006932 ORTHO05D009616 6.7e-07 58.5 81 39.5
Carub.0001s1959 Capsella rubella HOM05D006932 ORTHO05D009616 8.8e-07 58.2 89 42.7
Gohir.A05G185600 Gossypium hirsutum HOM05D006932 ORTHO05D009616 8.8e-07 58.2 208 29.8
QL02p012013 Quercus lobata HOM05D006932 ORTHO05D009616 8.8e-07 58.2 64 51.6
Dinv31864 Davidia involucrata HOM05D006932 ORTHO05D009616 2.0e-06 57.0 59 55.9
Gorai.009G193700 Gossypium raimondii HOM05D006932 ORTHO05D009616 2.0e-06 57.0 75 48.0
CsaV3_2G029620 Cucumis sativus L. HOM05D006932 ORTHO05D009616 2.6e-06 56.6 63 52.4
Sed0011683 Sechium edule HOM05D006932 ORTHO05D009616 2.6e-06 56.6 191 29.8
AUR62040551 Chenopodium quinoa HOM05D006932 ORTHO05D009616 3.3e-06 56.2 84 42.9
Eucgr.H00968 Eucalyptus grandis HOM05D006932 ORTHO05D014708 3.3e-06 56.2 76 44.7
Potri.013G068501 Populus trichocarpa HOM05D006932 ORTHO05D009616 3.3e-06 56.2 119 40.3
Thecc.08G046600 Theobroma cacao HOM05D006932 ORTHO05D009616 3.3e-06 56.2 147 35.4
Duzib093G0008 Durio zibethinus HOM05D006932 ORTHO05D009616 4.4e-06 55.8 114 36.0
CANSAT25G0116 Cannabis sativa HOM05D006932 ORTHO05D009616 5.7e-06 55.5 77 45.5


User provided reference genes

Program Settings