Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g041760.2 Solanum lycopersicum HOM05D000590 ORTHO05D009145 1.2e-172 609.8 303 100.0
Nitab4.5_0005958g0030 Nicotiana tabacum HOM05D000590 ORTHO05D009145 1.5e-98 363.6 366 57.9
Nitab4.5_0002992g0010 Nicotiana tabacum HOM05D028555 ORTHO05D009145 1.3e-94 350.5 350 58.3
Peaxi162Scf00116g00109 Petunia axillaris HOM05D000590 ORTHO05D009145 1.3e-86 323.9 367 52.3
Sopen08g011900 Solanum pennellii HOM05D000590 ORTHO05D009145 1.7e-86 323.6 210 80.5
CAN.G669.6 Capsicum annuum HOM05D000590 ORTHO05D009145 9.0e-48 194.9 194 57.7
CSS0004481 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D009145 1.1e-29 134.8 112 57.1
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 1.1e-29 134.8 130 53.1
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 2.7e-28 130.2 108 58.3
GSVIVG01035924001 Vitis vinifera HOM05D000590 ORTHO05D009145 4.6e-28 129.4 105 59.0
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 6.0e-28 129.0 105 58.1
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 1.0e-27 128.3 112 57.1
ATR0767G168 Amborella trichopoda HOM05D000590 ORTHO05D009145 1.3e-27 127.9 112 54.5
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 1.8e-27 127.5 105 57.1
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 1.8e-27 127.5 112 57.1
Rhsim02G0205200 Rhododendron simsii HOM05D000590 ORTHO05D009145 3.9e-27 126.3 125 54.4
Ciclev10010421m.g Citrus clementina HOM05D000590 ORTHO05D009145 5.1e-27 125.9 105 59.0
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 5.1e-27 125.9 106 56.6
Cpa.g.sc187.20 Carica papaya HOM05D000590 ORTHO05D009145 1.1e-26 124.8 109 57.8
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 1.1e-26 124.8 114 54.4
Actinidia22317 Actinidia chinensis HOM05D000590 ORTHO05D009145 1.5e-26 124.4 105 58.1
Gohir.A07G030000 Gossypium hirsutum HOM05D000590 ORTHO05D009145 2.5e-26 123.6 111 55.0
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 3.3e-26 123.2 111 54.1
Lj7A728T62 Lonicera japonica HOM05D000590 ORTHO05D009145 5.7e-26 122.5 111 54.1
Gohir.D07G033800 Gossypium hirsutum HOM05D000590 ORTHO05D009145 7.4e-26 122.1 111 54.1
Cc08_g00250 Coffea canephora HOM05D000590 ORTHO05D009145 9.7e-26 121.7 109 55.0
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 1.3e-25 121.3 109 56.0
ECA248G0426 Erigeron canadensis HOM05D000590 ORTHO05D009145 1.6e-25 120.9 118 55.9
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 2.2e-25 120.6 109 56.0
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 4.8e-25 119.4 105 56.2
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 4.8e-25 119.4 109 52.3
Gorai.001G035300 Gossypium raimondii HOM05D000590 ORTHO05D009145 6.3e-25 119.0 111 53.2
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 8.2e-25 118.6 104 55.8
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 1.1e-24 118.2 104 55.8
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 3.1e-24 116.7 109 56.9
RcHm_v2.0_Chr6g0297291 Rosa chinensis HOM05D000590 ORTHO05D009145 4.1e-24 116.3 104 52.9
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 1.2e-23 114.8 105 51.4
FvH4_2g28350 Fragaria vesca HOM05D000590 ORTHO05D009145 2.0e-23 114.0 104 52.9
FAN20G2931 Fragaria x ananassa HOM05D000590 ORTHO05D009145 2.0e-23 114.0 104 52.9
FAN24G2365 Fragaria x ananassa HOM05D000590 ORTHO05D009145 2.0e-23 114.0 104 52.9
SGA_v2.0_scaffold64G21984 Striga asiatica HOM05D000590 ORTHO05D009145 2.6e-23 113.6 156 42.9
CANSAT25G0126 Cannabis sativa HOM05D000590 ORTHO05D009145 3.4e-23 113.2 106 54.7
FAN27G0748 Fragaria x ananassa HOM05D000590 ORTHO05D009145 3.4e-23 113.2 104 52.9
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 4.5e-23 112.8 111 51.4
Lj5g0001427 Lotus japonicus HOM05D000590 ORTHO05D009145 7.6e-23 112.1 285 31.2
THA.LOC104815012 Tarenaya hassleriana HOM05D000590 ORTHO05D009145 1.3e-22 111.3 110 50.0
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 1.7e-22 110.9 112 51.8
Sc06g0000460 Simmondsia chinensis HOM05D000590 ORTHO05D009145 3.8e-22 109.8 107 50.5
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 5.0e-22 109.4 105 52.4
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 6.5e-22 109.0 105 52.4
HanXRQChr01g0030621 Helianthus annuus HOM05D000590 ORTHO05D009145 1.9e-21 107.5 117 50.4
arahy.Tifrunner.gnm1.ann1.8UN9ME Arachis hypogaea HOM05D000590 ORTHO05D009145 4.2e-21 106.3 109 55.0
SEGI_06897 Sequoiadendron giganteum HOM05D000590 ORTHO05D009145 4.2e-21 106.3 106 47.2
SEGI_36406 Sequoiadendron giganteum HOM05D000590 ORTHO05D009145 4.2e-21 106.3 106 47.2
SalBow4G1906 Salvia bowleyana HOM05D000590 ORTHO05D009145 2.1e-20 104.0 105 51.4
Lsat_1_v5_gn_1_43780 Lactuca sativa HOM05D000590 ORTHO05D009145 7.9e-20 102.1 112 50.9
HPP92_000484 Vanilla planifolia HOM05D000590 ORTHO05D009145 1.0e-19 101.7 106 48.1
VMungo0647G0757 Vigna mungo HOM05D000590 ORTHO05D009145 1.4e-19 101.3 105 49.5
Phvul.001G047700 Phaseolus vulgaris HOM05D000590 ORTHO05D009145 1.8e-19 100.9 105 48.6
Sopen08g011910 Solanum pennellii HOM05D000590 ORTHO05D009145 2.3e-19 100.5 53 88.7
Medtr1g012890 Medicago truncatula HOM05D000590 ORTHO05D009145 3.9e-19 99.8 105 48.6
AUR62031566 Chenopodium quinoa HOM05D000590 ORTHO05D009145 5.7e-18 95.9 111 45.0
Hund04451 Selenicereus undatus HOM05D000590 ORTHO05D009145 9.7e-18 95.1 105 46.7
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 2.8e-17 93.6 111 44.1
Ah.10g035720 Amaranthus hybridus HOM05D000590 ORTHO05D009145 4.1e-16 89.7 114 45.6
TPR.G38859 Trifolium pratense HOM05D000590 ORTHO05D009145 2.0e-15 87.4 172 36.0
Zm00001eb104540 Zea mays HOM05D000590 ORTHO05D009145 2.9e-14 83.6 170 34.7
EL10Ac2g04159 Beta vulgaris HOM05D000590 ORTHO05D009145 5.0e-14 82.8 111 45.0
Ca_13040_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 8.5e-14 82.0 105 42.9
Ca_30354_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 8.5e-14 82.0 105 42.9
Actinidia13215 Actinidia chinensis HOM05D000590 ORTHO05D009145 1.1e-13 81.6 78 51.3
Medtr1g012910 Medicago truncatula HOM05D000590 ORTHO05D009145 5.5e-13 79.3 110 40.0
Os09g0556700 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D009145 9.4e-13 78.6 111 41.4
Pp3c14_19990 Physcomitrium patens HOM05D000590 ORTHO05D009145 9.4e-13 78.6 107 39.3
Pp3c2_10000 Physcomitrium patens HOM05D000590 ORTHO05D009145 1.7e-09 67.8 118 37.3
arahy.Tifrunner.gnm1.ann1.U79B3Z Arachis hypogaea HOM05D000590 ORTHO05D009145 1.4e-08 64.7 106 39.6
Mapoly0002s0198 Marchantia polymorpha HOM05D000590 ORTHO05D009145 4.1e-08 63.2 103 37.9
Pp3c1_28750 Physcomitrium patens HOM05D000590 ORTHO05D009145 2.6e-07 60.5 104 33.7
COL.COLO4_18906 Corchorus olitorius HOM05D000590 ORTHO05D009145 5.9e-07 59.3 39 69.2


User provided reference genes

Program Settings