Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 2.8e-132 475.3 247 100.0
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 3.8e-105 385.2 246 85.0
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-76 290.4 270 64.1
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-70 270.0 271 58.7
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.3e-68 261.2 271 59.0
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 4.0e-62 242.3 251 60.2
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.4e-43 178.7 137 67.9
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.5e-42 176.0 260 45.0
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.9e-40 170.2 234 50.9
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 6.9e-38 161.8 257 42.4
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 2.4e-35 153.3 252 40.9
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 1.6e-31 140.6 277 39.0
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 4.5e-29 132.5 131 67.2
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-22 110.2 248 35.5
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-20 104.4 112 48.2
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.7e-20 104.0 112 48.2
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 2.2e-20 103.6 148 43.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.2e-20 103.6 143 42.0
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-19 100.9 112 49.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-19 100.9 101 49.5
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.9e-19 100.5 112 46.4
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 2.5e-19 100.1 121 41.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 3.2e-19 99.8 121 41.3
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.2e-19 99.4 114 46.5
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-19 99.4 121 41.3
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-19 99.4 121 41.3
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-19 99.4 121 41.3
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 4.2e-19 99.4 121 42.1
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.1e-19 98.6 112 46.4
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.3e-19 98.2 111 48.6
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-18 97.4 92 50.0
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.6e-18 97.4 105 49.5
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.3e-17 94.4 88 45.5
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-17 93.6 105 45.7
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.3e-17 93.6 259 32.8
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.1e-17 92.4 85 49.4
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 8.7e-17 91.7 97 47.4
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-16 91.3 137 42.3
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-16 90.9 137 42.3
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-16 90.9 137 42.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-16 90.5 137 42.3
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.3e-16 89.4 113 49.6
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.7e-16 89.0 89 49.4
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 7.4e-16 88.6 193 36.3
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.6e-16 88.2 152 36.8
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-15 87.0 137 41.6
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.2e-15 85.1 237 31.6
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 8.2e-15 85.1 141 41.1
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-13 81.3 55 70.9
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.0e-13 80.5 145 35.2
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.4e-13 79.7 55 63.6
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 4.5e-13 79.3 142 38.0
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.3e-11 71.6 91 44.0
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.1e-10 68.9 81 46.9
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.9e-10 68.6 80 43.8
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-09 67.8 150 35.3
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-09 66.2 117 39.3
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 1.1e-08 64.7 134 36.6
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 2.5e-08 63.5 79 46.8
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 3.3e-08 63.2 220 32.7
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 4.3e-08 62.8 117 35.9
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.3e-08 62.8 123 38.2
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 7.4e-08 62.0 77 44.2
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.3e-07 61.2 92 40.2
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-07 60.8 112 38.4
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.6e-07 60.8 99 41.4
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 2.2e-07 60.5 85 45.9
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 2.8e-07 60.1 73 49.3
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 6.3e-07 58.9 61 49.2
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.2e-07 58.5 99 40.4
Sopen04g019260 Solanum pennellii HOM05D004064 ORTHO05D009909 8.2e-07 58.5 90 45.6
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 8.2e-07 58.5 143 37.1
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 1.1e-06 58.2 160 38.8
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-06 58.2 99 39.4
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.4e-06 57.8 114 40.4
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 1.4e-06 57.8 77 45.5
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-06 57.4 99 39.4
PGSC0003DMG400016298 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.8e-06 57.4 55 58.2
Sopen02g005360 Solanum pennellii HOM05D004064 ORTHO05D009909 2.4e-06 57.0 165 33.3
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-06 56.6 99 39.4
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-06 56.6 99 39.4
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 3.1e-06 56.6 91 37.4
CAN.G834.15 Capsicum annuum HOM05D004064 ORTHO05D009909 6.9e-06 55.5 57 56.1
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.9e-06 55.5 234 29.1
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.9e-06 55.5 116 37.9
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.9e-06 55.5 99 39.4
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.9e-06 55.5 99 39.4


User provided reference genes

Program Settings