Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 1.4e-242 842.4 403 100.0
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 3.5e-241 837.8 403 99.5
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 7.6e-212 740.3 405 90.4
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 3.1e-165 585.5 404 74.3
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 4.7e-145 518.5 367 72.8
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.1e-128 464.2 405 57.5
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.8e-120 436.8 408 54.2
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 4.2e-117 425.6 313 70.6
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 2.1e-116 423.3 408 52.9
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 4.5e-111 405.6 408 52.9
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.3e-110 404.1 407 52.8
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 3.2e-109 399.4 406 52.5
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 3.9e-107 392.5 403 50.9
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 3.3e-106 389.4 402 51.2
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 2.1e-105 386.7 402 49.0
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 4.8e-105 385.6 402 48.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.8e-104 383.6 403 48.6
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 5.3e-104 382.1 403 49.4
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 5.3e-104 382.1 404 47.0
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 6.9e-104 381.7 399 49.9
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 9.9e-103 377.9 403 47.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.7e-102 377.1 403 46.2
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.7e-102 377.1 400 46.5
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.8e-102 375.9 408 47.5
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.8e-102 375.9 378 51.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 4.9e-102 375.6 402 48.5
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 4.9e-102 375.6 406 49.3
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.1e-100 370.2 404 48.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 2.7e-100 369.8 402 47.3
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.5e-100 369.4 402 47.3
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 3.5e-100 369.4 403 48.1
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 7.9e-100 368.2 403 48.6
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.0e-99 367.9 402 48.0
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.0e-99 366.3 402 47.0
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 3.3e-98 362.8 391 47.3
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 5.6e-98 362.1 408 44.9
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.3e-97 360.9 402 46.0
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 3.1e-96 356.3 407 45.2
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.3e-96 355.5 334 53.0
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 6.9e-96 355.1 405 44.9
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 6.9e-96 355.1 407 47.4
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 9.0e-96 354.8 404 47.8
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.2e-95 354.4 334 52.7
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 7.9e-92 341.7 402 45.0
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 3.9e-91 339.3 399 44.9
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 8.7e-91 338.2 399 44.4
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.5e-90 337.4 400 43.8
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.6e-89 334.0 334 51.2
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.8e-89 333.2 400 44.8
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 2.4e-88 330.1 401 43.1
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 6.9e-88 328.6 401 44.9
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 8.5e-86 321.6 398 44.0
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.6e-84 316.2 408 44.1
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.8e-83 313.9 400 44.0
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 3.0e-83 313.2 400 44.0
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 3.0e-83 313.2 400 44.0
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 6.7e-83 312.0 400 43.8
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 7.4e-82 308.5 400 43.2
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 9.1e-80 301.6 375 43.2
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.4e-79 299.7 323 50.2
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 1.1e-77 294.7 380 42.9
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.9e-77 293.9 337 46.6
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 4.4e-74 282.7 383 42.3
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 4.4e-74 282.7 405 40.7
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 9.1e-72 275.0 395 41.3
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 5.0e-70 269.2 361 41.6
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 5.2e-67 259.2 396 36.9
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 4.4e-66 256.1 407 36.9
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 1.2e-52 211.5 395 30.9
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 3.8e-46 189.9 193 49.7
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.2e-39 168.3 251 40.2
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 2.6e-26 124.0 141 46.1


User provided reference genes

Program Settings