Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.6e-16 88.2 42 100.0
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 6.0e-11 69.7 38 84.2
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.0e-10 68.9 38 78.9
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.9e-09 64.7 36 77.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 3.3e-09 63.9 38 73.7
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 4.3e-09 63.5 34 79.4
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.3e-09 63.5 36 75.0
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 4.3e-09 63.5 36 72.2
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 9.6e-09 62.4 38 73.7
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 9.6e-09 62.4 36 72.2
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.3e-08 62.0 34 76.5
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.3e-08 62.0 34 76.5
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.1e-08 61.2 36 72.2
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 2.1e-08 61.2 38 71.1
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 2.1e-08 61.2 36 72.2
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.1e-08 61.2 38 68.4
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 2.1e-08 61.2 36 75.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.8e-08 60.8 34 73.5
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 2.8e-08 60.8 34 73.5
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 3.7e-08 60.5 36 72.2
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.7e-08 60.5 33 78.8
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 4.8e-08 60.1 36 69.4
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.8e-08 60.1 38 65.8
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 6.2e-08 59.7 34 67.6
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 8.2e-08 59.3 34 73.5
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.1e-07 58.9 38 65.8
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.1e-07 58.9 36 69.4
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.4e-07 58.5 36 66.7
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.4e-07 58.5 32 84.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.4e-07 58.5 32 84.4
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.8e-07 58.2 36 69.4
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.8e-07 58.2 36 69.4
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.8e-07 58.2 36 69.4
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.8e-07 58.2 36 69.4
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.8e-07 58.2 36 69.4
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.4e-07 57.8 35 68.6
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 2.4e-07 57.8 35 68.6
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.4e-07 57.8 33 72.7
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.4e-07 57.8 34 73.5
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.1e-07 57.4 36 66.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 3.1e-07 57.4 34 67.6
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.1e-07 57.4 34 70.6
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.0e-07 57.0 34 70.6
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 4.0e-07 57.0 36 69.4
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 4.0e-07 57.0 36 63.9
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 4.0e-07 57.0 36 66.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 4.0e-07 57.0 36 66.7
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 4.0e-07 57.0 34 70.6
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 4.0e-07 57.0 36 66.7
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 5.3e-07 56.6 34 73.5
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 5.3e-07 56.6 34 70.6
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 5.3e-07 56.6 35 68.6
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 6.9e-07 56.2 35 71.4
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 6.9e-07 56.2 34 67.6
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.0e-07 55.8 34 73.5
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.2e-06 55.5 34 64.7
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.2e-06 55.5 34 64.7
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.2e-06 55.5 36 66.7
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.2e-06 55.5 34 70.6
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.2e-06 55.5 36 61.1
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.5e-06 55.1 33 72.7
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.5e-06 55.1 34 70.6
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 2.0e-06 54.7 36 66.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.0e-06 54.7 36 66.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.6e-06 54.3 34 70.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-06 54.3 34 70.6
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-06 54.3 34 70.6
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-06 54.3 34 70.6
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.6e-06 54.3 36 63.9
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.6e-06 54.3 34 67.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.4e-06 53.9 34 64.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.5e-06 53.5 34 64.7
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 4.5e-06 53.5 33 66.7
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 5.8e-06 53.1 36 66.7
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 7.6e-06 52.8 34 61.8
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 7.6e-06 52.8 38 57.9
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 7.6e-06 52.8 34 67.6
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.0e-05 52.4 33 66.7


User provided reference genes

Program Settings