Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-74 283.1 135 100.0
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 2.9e-67 258.5 126 97.6
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.8e-24 116.3 129 51.2
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.2e-20 103.6 122 45.9
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.7e-20 102.4 125 44.0
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.8e-19 99.8 123 42.3
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.0e-19 99.0 117 46.2
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-18 96.3 114 45.6
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 6.2e-17 91.3 116 43.1
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.4e-16 90.1 122 38.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.3e-16 88.2 126 38.9
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.5e-15 86.7 126 39.7
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 2.0e-15 86.3 122 36.9
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.6e-15 85.9 133 35.3
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-15 85.9 120 37.5
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 4.5e-15 85.1 122 36.1
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 9.9e-15 84.0 123 35.8
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-14 82.8 121 36.4
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.9e-14 82.4 125 36.8
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.9e-14 82.4 119 36.1
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.4e-14 81.3 120 35.8
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 8.4e-14 80.9 120 34.2
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 8.4e-14 80.9 122 33.6
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.4e-13 80.1 115 36.5
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-13 79.3 122 34.4
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.2e-13 79.0 133 32.3
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 4.2e-13 78.6 116 37.1
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.5e-13 78.2 118 37.3
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.7e-12 75.9 115 33.9
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.5e-12 75.5 122 33.6
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 4.6e-12 75.1 118 36.4
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-12 74.7 114 39.5
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 7.9e-12 74.3 110 37.3
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.9e-12 74.3 120 33.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-11 73.9 115 35.7
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.3e-11 73.6 119 33.6
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.3e-11 73.6 117 38.5
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.3e-11 72.8 121 32.2
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.7e-11 71.2 125 32.8
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.7e-11 71.2 122 31.1
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.1e-09 66.2 118 33.9
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 2.1e-09 66.2 128 28.9
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.7e-09 65.5 101 34.7
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 8.2e-09 64.3 118 33.1
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.1e-08 63.9 115 33.9
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 2.0e-07 59.7 117 33.3
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 2.0e-07 59.7 118 29.7
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 7.6e-07 57.8 116 32.8
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.0e-06 57.4 90 37.8
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.0e-06 57.4 116 30.2
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.0e-06 57.4 116 34.5
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 3.8e-06 55.5 114 33.3
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 4.9e-06 55.1 114 31.6
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 4.9e-06 55.1 73 42.5
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 4.9e-06 55.1 63 42.9
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.9e-06 55.1 116 29.3
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.4e-06 54.3 67 43.3


User provided reference genes

Program Settings