Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g023550.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 2.4e-30 134.8 66 100.0
Solyc03g071610.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 1.7e-23 112.1 65 80.0
Solyc05g041510.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 2.9e-20 101.3 64 76.6
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 8.3e-15 83.2 64 54.7
Oeu009496.1 Olea europaea HOM05D001338 ORTHO05D001239 5.4e-14 80.5 64 53.1
Oeu018676.2 Olea europaea HOM05D001338 ORTHO05D001239 7.0e-14 80.1 64 53.1
CARHR117440 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.5e-13 77.8 64 51.6
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 7.8e-13 76.6 64 51.6
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 1.3e-12 75.9 64 50.0
Oeu055078.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-12 75.5 64 48.4
Oeu058818.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-12 75.1 64 50.0
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-11 72.4 64 45.3
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-11 72.4 64 45.3
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-11 72.4 64 45.3
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 2.5e-11 71.6 64 46.9
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 3.3e-11 71.2 64 50.0
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.3e-11 71.2 64 50.0
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.3e-11 70.1 64 45.3
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.3e-11 70.1 64 45.3
CiPaw.11G014600 Carya illinoinensis HOM05D001338 ORTHO05D001239 9.5e-11 69.7 63 50.8
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-11 69.7 64 43.8
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-11 69.7 64 45.3
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 9.5e-11 69.7 64 46.9
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.2e-10 69.3 64 43.8
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 1.2e-10 69.3 64 43.8
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 2.1e-10 68.6 64 45.3
CANSAT21G0346 Cannabis sativa HOM05D001338 ORTHO05D001239 2.1e-10 68.6 64 45.3
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 2.1e-10 68.6 64 45.3
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 2.1e-10 68.6 58 48.3
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.1e-10 68.6 64 46.9
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-10 68.2 64 42.2
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-10 68.2 64 42.2
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 4.7e-10 67.4 64 46.9
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 6.1e-10 67.0 63 44.4
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 8.0e-10 66.6 61 49.2
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 8.0e-10 66.6 64 43.8
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.0e-09 66.2 64 43.8
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.0e-09 66.2 64 43.8
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.0e-09 66.2 64 43.8
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-09 65.9 64 42.2
CANSAT46G0003 Cannabis sativa HOM05D001338 ORTHO05D001239 1.4e-09 65.9 64 42.2
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.8e-09 65.5 64 42.2
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.8e-09 65.5 61 44.3
Aqoxy7G02175 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.3e-09 65.1 64 42.2
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 2.3e-09 65.1 64 42.2
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-09 65.1 62 46.8
PSO339G3227 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-09 65.1 64 40.6
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.1e-09 64.7 64 40.6
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 3.1e-09 64.7 64 40.6
CANSAT64G2348 Cannabis sativa HOM05D001338 ORTHO05D001239 3.1e-09 64.7 63 42.9
TPR.G35432 Trifolium pratense HOM05D001338 ORTHO05D001239 5.2e-09 63.9 64 43.8
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 6.8e-09 63.5 64 42.2
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.8e-09 63.5 60 43.3
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 40.6
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 40.6
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 40.6
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 40.6
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 42.2
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 8.9e-09 63.2 64 40.6
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.2e-08 62.8 64 43.8
PSO210G2267 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-08 62.8 56 46.4
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.5e-08 62.4 64 39.1
Oeu018627.1 Olea europaea HOM05D001338 ORTHO05D001239 1.5e-08 62.4 56 48.2
Gohir.D05G274450 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.0e-08 62.0 64 40.6
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.0e-08 62.0 60 41.7
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.4e-08 61.2 63 39.7
CSS0023742 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.4e-08 61.2 51 47.1
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-08 61.2 64 39.1
CANSAT35G0841 Cannabis sativa HOM05D001338 ORTHO05D001239 4.4e-08 60.8 63 39.7
Gorai.009G287700 Gossypium raimondii HOM05D001338 ORTHO05D001239 4.4e-08 60.8 64 39.1
Solyc11g061950.1 Solanum lycopersicum HOM05D001338 ORTHO05D001239 4.4e-08 60.8 34 73.5
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 7.5e-08 60.1 64 37.5
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 7.5e-08 60.1 64 39.1
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 9.8e-08 59.7 64 39.1
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 9.8e-08 59.7 64 39.1
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-07 59.3 64 40.6
PSO170G3462 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-07 58.9 64 39.1
PSO138G0008 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-07 58.5 65 36.9
PSO138G0009 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-07 58.5 65 36.9
FvH4_4g14434 Fragaria vesca HOM05D001338 ORTHO05D001239 2.9e-07 58.2 64 39.1
PSO421G0468 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-07 58.2 64 40.6
PSO541G4464 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-07 58.2 62 38.7
CARHR289900 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.7e-07 57.8 64 37.5
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 3.7e-07 57.8 64 40.6
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.7e-07 57.8 64 37.5
PSO384G4498 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-07 57.4 64 35.9
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 6.4e-07 57.0 61 36.1
PSO675G4675 Papaver somniferum HOM05D001338 ORTHO05D001239 6.4e-07 57.0 56 42.9
CARHR048790 Cardamine hirsuta HOM05D001338 ORTHO05D001239 8.3e-07 56.6 64 39.1
Oeu060590.1 Olea europaea HOM05D001338 ORTHO05D001239 8.3e-07 56.6 64 40.6
Atru.chr2.1436 Acer truncatum HOM05D001338 ORTHO05D001239 1.1e-06 56.2 63 38.1
CANSAT21G1775 Cannabis sativa HOM05D001338 ORTHO05D001239 1.1e-06 56.2 66 37.9
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-06 56.2 64 43.8
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-06 56.2 63 36.5
CARHR290850 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.4e-06 55.8 56 42.9
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.4e-06 55.8 64 37.5
Atru.chr12.2101 Acer truncatum HOM05D001338 ORTHO05D001239 1.9e-06 55.5 63 34.9
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 1.9e-06 55.5 63 39.7
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-06 55.5 64 39.1
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-06 55.1 64 39.1
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-06 55.1 63 38.1
PSO781G0024 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-06 55.1 64 39.1
ECA233G3047 Erigeron canadensis HOM05D001338 ORTHO05D001239 4.1e-06 54.3 56 39.3
PSO063G6488 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-06 54.3 64 37.5
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-06 54.3 64 37.5
PSO144G0154 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-06 54.3 64 37.5
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-06 54.3 63 38.1
PSO724G0816 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-06 54.3 64 37.5
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-06 53.9 63 39.7
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-06 53.9 63 41.3
CARHR252010 Cardamine hirsuta HOM05D001338 ORTHO05D001239 7.0e-06 53.5 49 46.9
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-06 53.1 64 37.5


User provided reference genes

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