Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.9e-87 325.1 154 100.0
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 8.5e-87 323.6 154 99.4
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 6.5e-79 297.4 151 94.7
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.5e-70 268.9 154 81.2
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.3e-68 262.3 152 81.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 1.7e-66 256.1 150 77.3
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 6.2e-45 184.5 146 58.9
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 7.1e-41 171.0 152 57.2
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.6e-40 169.9 152 56.6
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.6e-40 169.9 148 55.4
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.1e-40 169.5 150 55.3
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 3.5e-40 168.7 133 59.4
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 6.0e-40 167.9 148 54.7
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 7.8e-40 167.5 148 54.7
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.8e-40 167.5 148 54.7
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.3e-39 166.8 148 54.7
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 5.1e-39 164.9 148 53.4
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 6.6e-39 164.5 147 53.1
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 3.3e-38 162.2 146 52.1
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 9.5e-38 160.6 147 54.4
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.2e-37 160.2 151 55.0
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 3.6e-37 158.7 146 52.7
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 8.1e-37 157.5 154 48.7
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 1.4e-36 156.8 146 54.1
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.4e-36 156.8 154 50.6
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.8e-36 156.4 137 55.5
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 5.2e-36 154.8 146 54.8
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 5.2e-36 154.8 147 53.7
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 6.8e-36 154.5 146 52.1
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 8.9e-36 154.1 148 50.7
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.2e-35 153.7 120 59.2
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 2.0e-35 152.9 153 46.4
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.6e-35 152.5 134 55.2
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 2.6e-35 152.5 136 55.1
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 4.4e-35 151.8 153 47.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 7.6e-35 151.0 153 45.1
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 7.6e-35 151.0 148 49.3
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 9.9e-35 150.6 149 48.3
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.7e-34 149.8 148 49.3
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.2e-34 149.4 146 47.9
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.2e-34 149.4 146 46.6
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 3.7e-34 148.7 137 55.5
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.7e-34 148.7 148 49.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.7e-34 148.7 146 45.9
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 4.9e-34 148.3 149 47.7
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 8.4e-34 147.5 146 46.6
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.1e-33 147.1 151 46.4
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 1.1e-33 147.1 128 54.7
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.4e-33 146.7 148 46.6
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 2.4e-33 146.0 149 46.3
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 3.2e-33 145.6 149 46.3
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.2e-32 143.7 130 55.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 2.1e-32 142.9 138 54.3
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.7e-32 142.5 137 52.6
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 4.6e-32 141.7 150 46.7
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.8e-32 141.0 137 51.8
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.0e-31 140.6 154 46.1
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.7e-31 139.8 158 46.8
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 2.3e-31 139.4 154 45.5
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 3.0e-31 139.0 150 48.0
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.0e-31 139.0 148 45.3
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 3.9e-31 138.7 148 47.3
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 1.9e-30 136.3 128 54.7
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 4.3e-30 135.2 131 52.7
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 5.6e-30 134.8 133 48.9
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 7.3e-30 134.4 149 47.7
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.6e-29 133.3 144 45.8
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 4.7e-29 131.7 127 54.3
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.4e-28 130.2 135 51.9
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.1e-28 129.0 127 53.5
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 3.1e-28 129.0 149 40.3
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 4.0e-28 128.6 148 41.2
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 6.8e-28 127.9 148 43.2
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 8.9e-28 127.5 148 42.6
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.0e-27 126.3 148 42.6
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.4e-27 125.6 122 53.3
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.3e-26 123.6 135 48.1
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 4.9e-26 121.7 135 48.1
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 6.0e-24 114.8 129 48.8
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 6.6e-23 111.3 162 40.1
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.5e-22 110.2 137 41.6
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.3e-22 109.0 137 38.7
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.3e-18 97.1 132 40.9
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.1e-16 89.7 141 36.2
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.3e-14 81.3 90 40.0
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 5.3e-12 75.1 85 47.1
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.8e-10 68.9 79 44.3


User provided reference genes

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