Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g021870.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 3.2e-52 208.4 122 100.0
Sopen08g009070 Solanum pennellii HOM05D000448 ORTHO05D000291 3.1e-39 165.2 88 89.8
Peaxi162Scf00565g00077 Petunia axillaris HOM05D000448 ORTHO05D000291 9.3e-20 100.5 82 58.5
Peaxi162Scf00565g00065 Petunia axillaris HOM05D000448 ORTHO05D000291 2.3e-18 95.9 81 56.8
Hma1.2p1_2573F.1_g324643 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 3.3e-17 92.0 80 56.2
Hma1.2p1_2573F.1_g324650 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 3.3e-17 92.0 80 56.2
Hma1.2p1_2573F.1_g324636 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 6.2e-16 87.8 80 55.0
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 3.2e-12 75.5 76 48.7
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 4.6e-11 71.6 79 44.3
Hma1.2p1_0231F.1_g097550 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 6.0e-11 71.2 77 50.6
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.3e-10 70.1 84 46.4
AUR62043768 Chenopodium quinoa HOM05D000448 ORTHO05D000313 3.0e-10 68.9 83 38.6
Atru.chr7.1876 Acer truncatum HOM05D000448 ORTHO05D000291 3.9e-10 68.6 86 41.9
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 5.1e-10 68.2 79 40.5
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.5e-09 66.6 78 48.7
AUR62008893 Chenopodium quinoa HOM05D000448 ORTHO05D000313 1.5e-09 66.6 87 44.8
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.5e-09 66.6 85 38.8
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.5e-09 66.6 85 38.8
Nn8g41108 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.9e-09 66.2 79 44.3
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.3e-09 65.5 86 38.4
AUR62009254 Chenopodium quinoa HOM05D000480 ORTHO05D000313 4.3e-09 65.1 85 38.8
AUR62044581 Chenopodium quinoa HOM05D000480 ORTHO05D000313 9.6e-09 63.9 85 37.6
AUR62044582 Chenopodium quinoa HOM05D000480 ORTHO05D000313 9.6e-09 63.9 85 37.6
AUR62001038 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-08 63.5 78 42.3
Hma1.2p1_2284F.1_g318890 Hydrangea macrophylla HOM05D000448 ORTHO05D000313 1.3e-08 63.5 79 45.6
AUR62031816 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.6e-08 63.2 78 44.9
MELO3C025814.2 Cucumis melo HOM05D000448 ORTHO05D000291 1.6e-08 63.2 87 39.1
RcHm_v2.0_Chr1g0342341 Rosa chinensis HOM05D000448 ORTHO05D000291 1.6e-08 63.2 87 40.2
AUR62004918 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.1e-08 62.8 78 43.6
Nn2g13316 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.1e-07 60.5 79 44.3
Eucgr.C03587 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.4e-07 60.1 77 37.7
GSVIVG01030638001 Vitis vinifera HOM05D000480 ORTHO05D000313 2.4e-07 59.3 87 41.4
Haze_09282 Corylus avellana HOM05D000448 ORTHO05D000291 3.1e-07 58.9 72 43.1
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 4.0e-07 58.5 83 37.3
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.0e-07 58.5 73 41.1
TAR383G0315 Trochodendron aralioides HOM05D000448 ORTHO05D000291 5.3e-07 58.2 65 47.7
CANSAT25G2306 Cannabis sativa HOM05D000448 ORTHO05D000291 9.0e-07 57.4 81 39.5
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 9.0e-07 57.4 86 33.7
Ciclev10003314m.g Citrus clementina HOM05D000448 ORTHO05D000291 9.0e-07 57.4 48 58.3
SalBow3G2035 Salvia bowleyana HOM05D000448 ORTHO05D000291 9.0e-07 57.4 85 35.3
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 9.0e-07 57.4 70 40.0
Nn1g04194 Nelumbo nucifera HOM05D000448 ORTHO05D000291 1.5e-06 56.6 64 40.6
TAR479G0001 Trochodendron aralioides HOM05D000448 ORTHO05D000291 2.0e-06 56.2 39 66.7
Cfa019716 Carpinus fangiana HOM05D000448 ORTHO05D000291 2.6e-06 55.8 85 34.1
CiPaw.03G112400 Carya illinoinensis HOM05D000448 ORTHO05D000291 3.4e-06 55.5 85 35.3
AUR62009257 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.4e-06 55.5 72 33.3
AUR62024369 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.5e-06 55.1 78 38.5
Medtr7g099580 Medicago truncatula HOM05D000448 ORTHO05D000313 1.0e-05 53.9 76 36.8
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.0e-05 53.9 55 45.5


User provided reference genes

Program Settings