Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g016000.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.4e-56 220.3 112 100.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-53 213.0 112 96.4
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.2e-53 213.0 112 96.4
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-53 213.0 112 96.4
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.2e-53 213.0 112 96.4
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.2e-53 213.0 112 96.4
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.2e-53 213.0 112 96.4
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.9e-48 195.7 112 89.3
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.3e-47 193.0 112 87.5
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.8e-31 138.7 112 65.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 7.2e-27 124.0 112 56.2
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.9e-25 118.2 112 54.5
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.0e-24 115.9 114 53.5
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.6e-24 115.5 80 72.5
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 7.4e-24 114.0 114 54.4
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 7.4e-24 114.0 114 54.4
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 7.4e-24 114.0 114 54.4
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 7.4e-24 114.0 114 54.4
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 7.4e-24 114.0 114 54.4
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 7.4e-24 114.0 114 54.4
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 7.4e-24 114.0 114 54.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 4.8e-23 111.3 112 50.9
Oeu012762.2 Olea europaea HOM05D001070 ORTHO05D002096 6.3e-23 110.9 96 60.4
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 8.2e-23 110.5 115 51.3
Peaxi162Scf00080g00515 Petunia axillaris HOM05D001070 ORTHO05D010233 5.3e-22 107.8 108 56.5
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 2.9e-20 102.1 103 52.4
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.9e-20 102.1 103 52.4
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 1.5e-19 99.8 96 56.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 3.2e-19 98.6 105 49.5
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.6e-18 96.3 105 49.5
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 8.0e-18 94.0 99 50.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 8.0e-18 94.0 112 44.6
Gohir.A05G323700 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.8e-17 92.8 86 53.5
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 2.3e-17 92.4 90 52.2
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 2.3e-17 92.4 90 52.2
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.2e-16 90.1 53 79.2
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 2.6e-16 89.0 99 46.5
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 2.6e-16 89.0 99 46.5
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 2.6e-16 89.0 99 46.5
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 5.7e-16 87.8 89 48.3
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 9.7e-16 87.0 89 47.2
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.3e-15 86.7 99 45.5
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.7e-15 86.3 112 44.6
HanXRQChr00c0379g0574341 Helianthus annuus HOM05D001070 ORTHO05D002096 4.8e-15 84.7 83 55.4
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 4.8e-15 84.7 96 45.8
C07p33490 Brassica napus HOM05D001070 ORTHO05D002096 8.2e-15 84.0 90 48.9
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 4.1e-14 81.6 79 53.2
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 5.3e-14 81.3 114 46.5
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 1.0e-12 77.0 125 40.0
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.3e-12 76.6 55 72.7
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 8.5e-12 73.9 106 41.5
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 8.0e-10 67.4 93 41.9
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 3.0e-09 65.5 95 42.1
Gohir.D01G134260 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.2e-08 63.5 57 54.4
Nitab4.5_0000729g0030 Nicotiana tabacum HOM05D001070 ORTHO05D010233 4.8e-07 58.2 39 69.2
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 5.4e-06 54.7 59 52.5


User provided reference genes

Program Settings