Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g013960.1 Solanum lycopersicum HOM05D000101 ORTHO05D012848 2.0e-101 372.5 192 100.0
PGSC0003DMG400012466 Solanum tuberosum HOM05D000101 ORTHO05D000089 2.5e-88 328.9 180 91.7
CAN.G1227.23 Capsicum annuum HOM05D000101 ORTHO05D000089 3.4e-77 292.0 180 78.9
PGSC0003DMG400012471 Solanum tuberosum HOM05D000101 ORTHO05D000089 7.6e-77 290.8 180 78.9
Sopen08g004810 Solanum pennellii HOM05D000101 ORTHO05D000089 7.1e-75 284.3 147 96.6
PGSC0003DMG400002275 Solanum tuberosum HOM05D000092 ORTHO05D000089 9.3e-75 283.9 178 79.8
PGSC0003DMG400012472 Solanum tuberosum HOM05D000101 ORTHO05D000089 2.7e-74 282.3 180 78.3
CAN.G137.49 Capsicum annuum HOM05D000101 ORTHO05D000089 4.0e-70 268.5 180 73.3
CAN.G2.66 Capsicum annuum HOM05D000101 ORTHO05D000089 6.5e-68 261.2 180 72.8
Nitab4.5_0003152g0120 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.9e-67 259.6 178 70.8
CAN.G845.7 Capsicum annuum HOM05D000101 ORTHO05D000089 9.3e-67 257.3 179 71.5
Nitab4.5_0002683g0040 Nicotiana tabacum HOM05D000101 ORTHO05D000089 9.3e-67 257.3 180 70.6
Nitab4.5_0002683g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.1e-66 256.1 180 70.0
CAN.G845.14 Capsicum annuum HOM05D000101 ORTHO05D000089 1.0e-65 253.8 180 70.0
Nitab4.5_0000185g0090 Nicotiana tabacum HOM05D000101 ORTHO05D000089 5.1e-65 251.5 178 69.7
Nitab4.5_0005412g0020 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.8e-63 245.7 180 67.8
Nitab4.5_0005412g0010 Nicotiana tabacum HOM05D000101 ORTHO05D000089 6.3e-63 244.6 178 68.0
Nitab4.5_0000185g0080 Nicotiana tabacum HOM05D000101 ORTHO05D000089 2.6e-61 239.2 180 68.3
Nitab4.5_0006415g0010 Nicotiana tabacum HOM05D000101 ORTHO05D012848 9.4e-59 230.7 179 64.8
Solyc06g048910.2 Solanum lycopersicum HOM05D000101 ORTHO05D000089 2.7e-58 229.2 180 63.9
PGSC0003DMG400019083 Solanum tuberosum HOM05D000101 ORTHO05D000089 7.4e-56 221.1 179 62.6
CAN.G2.59 Capsicum annuum HOM05D000101 ORTHO05D000089 2.6e-53 212.6 137 74.5
Peaxi162Scf00102g00936 Petunia axillaris HOM05D000101 ORTHO05D000089 1.7e-52 209.9 170 62.9
CAN.G845.4 Capsicum annuum HOM05D000101 ORTHO05D000089 2.1e-50 203.0 137 72.3
CAN.G845.3 Capsicum annuum HOM05D000101 ORTHO05D000089 1.8e-49 199.9 137 71.5
CAN.G1646.8 Capsicum annuum HOM05D000101 ORTHO05D000089 2.6e-48 196.1 137 72.3
CAN.G2.60 Capsicum annuum HOM05D000101 ORTHO05D000089 1.3e-47 193.7 137 69.3
CAN.G845.9 Capsicum annuum HOM05D000092 ORTHO05D000089 3.7e-47 192.2 137 70.1
PGSC0003DMG400002276 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.8e-46 189.9 179 59.8
CAN.G845.5 Capsicum annuum HOM05D000101 ORTHO05D000089 2.0e-45 186.4 129 72.9
CAN.G673.10 Capsicum annuum HOM05D000101 ORTHO05D000089 9.4e-43 177.6 135 65.9
Sopen08g003220 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-42 175.3 137 67.2
Nitab4.5_0000185g0070 Nicotiana tabacum HOM05D000101 ORTHO05D000089 4.5e-37 158.7 149 51.7
CAN.G845.1 Capsicum annuum HOM05D000101 ORTHO05D000089 3.6e-34 149.1 140 62.1
CAN.G561.27 Capsicum annuum HOM05D000101 ORTHO05D000089 7.0e-30 134.8 79 79.7
CAN.G845.13 Capsicum annuum HOM05D000101 ORTHO05D000089 1.6e-29 133.7 90 75.6
Actinidia09962 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.0e-28 131.0 174 38.5
PGSC0003DMG400012470 Solanum tuberosum HOM05D000101 ORTHO05D000089 1.0e-28 131.0 92 71.7
Dinv22309 Davidia involucrata HOM05D000101 ORTHO05D000089 7.2e-27 124.8 178 38.8
Hma1.2p1_2028F.1_g311700 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.7e-23 113.6 179 38.0
Sopen06g015230 Solanum pennellii HOM05D000101 ORTHO05D000089 8.3e-23 111.3 102 57.8
CAN.G561.26 Capsicum annuum HOM05D000101 ORTHO05D000089 2.4e-22 109.8 84 66.7
TAR627G0768 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.2e-21 107.5 178 36.5
TAR636G0948 Trochodendron aralioides HOM05D000101 ORTHO05D000089 2.9e-20 102.8 178 34.8
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.6e-18 95.9 180 33.3
Hma1.2p1_0348F.1_g131880 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.0e-18 94.7 182 32.4
Cfa020427 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.3e-17 93.2 178 30.3
CAN.G285.2 Capsicum annuum HOM05D000101 ORTHO05D000089 3.0e-17 92.8 62 77.4
QL08p013415 Quercus lobata HOM05D000092 ORTHO05D000089 1.2e-16 90.9 177 32.2
Cfa020430 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.6e-16 89.7 178 32.6
QL08p013403 Quercus lobata HOM05D000101 ORTHO05D000089 2.6e-16 89.7 172 32.0
QL08p013754 Quercus lobata HOM05D000101 ORTHO05D000089 2.6e-16 89.7 178 30.9
QL08p013433 Quercus lobata HOM05D000092 ORTHO05D000089 4.4e-16 89.0 178 30.3
Ciclev10007376m.g Citrus clementina HOM05D000101 ORTHO05D000089 7.5e-16 88.2 169 32.0
QL12p007021 Quercus lobata HOM05D000101 ORTHO05D000089 9.8e-16 87.8 175 30.3
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.3e-15 87.4 175 30.9
QL12p007040 Quercus lobata HOM05D000101 ORTHO05D000089 2.2e-15 86.7 175 29.7
QL06p046470 Quercus lobata HOM05D000101 ORTHO05D000089 3.7e-15 85.9 177 31.1
QL12p007076 Quercus lobata HOM05D000101 ORTHO05D000089 3.7e-15 85.9 175 29.1
Hma1.2p1_1295F.1_g273900 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.4e-14 84.0 181 32.0
CiPaw.12G126200 Carya illinoinensis HOM05D000101 ORTHO05D000089 9.2e-14 81.3 180 31.1
Hma1.2p1_0445F.1_g154380 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 9.2e-14 81.3 169 32.0
QL08p013532 Quercus lobata HOM05D000101 ORTHO05D000089 1.6e-13 80.5 180 30.0
MBI18_g12151_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 3.5e-13 79.3 178 27.0
MBI18_g12155_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 3.5e-13 79.3 178 27.0
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 3.5e-13 79.3 178 33.7
QL08p013726 Quercus lobata HOM05D000101 ORTHO05D000089 4.5e-13 79.0 180 29.4
CiPaw.01G042400 Carya illinoinensis HOM05D000101 ORTHO05D000089 5.9e-13 78.6 161 30.4
CiPaw.01G041900 Carya illinoinensis HOM05D000101 ORTHO05D000089 7.8e-13 78.2 178 29.8
TAR627G0724 Trochodendron aralioides HOM05D000101 ORTHO05D012848 7.8e-13 78.2 168 32.1
MBI18_g27850_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 1.3e-12 77.4 178 27.0
TAR626G0387 Trochodendron aralioides HOM05D000092 ORTHO05D000089 1.7e-12 77.0 169 29.6
QL08p013743 Quercus lobata HOM05D000101 ORTHO05D000089 2.9e-12 76.3 180 28.9
Hma1.2p1_2217F.1_g317270 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.8e-12 75.9 192 30.7
Cfa020425 Carpinus fangiana HOM05D000101 ORTHO05D000089 8.6e-12 74.7 178 29.8
Haze_09599 Corylus avellana HOM05D000101 ORTHO05D000089 8.6e-12 74.7 150 29.3
Hma1.2p1_1742F.1_g300170 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.5e-11 73.9 192 30.2
CiPaw.11G103500 Carya illinoinensis HOM05D000101 ORTHO05D000089 1.9e-11 73.6 178 28.1
Haze_09603 Corylus avellana HOM05D000101 ORTHO05D000089 4.3e-11 72.4 154 31.8
Haze_20878 Corylus avellana HOM05D000075 ORTHO05D000089 5.6e-11 72.0 169 26.6
CiPaw.01G041600 Carya illinoinensis HOM05D000101 ORTHO05D000089 7.3e-11 71.6 179 27.9
CiPaw.01G042000 Carya illinoinensis HOM05D000101 ORTHO05D000089 7.3e-11 71.6 179 27.9
CiPaw.01G042600 Carya illinoinensis HOM05D000101 ORTHO05D000089 1.6e-10 70.5 179 30.2
CiPaw.01G040900 Carya illinoinensis HOM05D000101 ORTHO05D000089 3.6e-10 69.3 179 29.6
CiPaw.01G041000 Carya illinoinensis HOM05D000101 ORTHO05D000089 1.4e-09 67.4 179 29.1
GSVIVG01014596001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.8e-09 67.0 179 29.1
Haze_09605 Corylus avellana HOM05D000101 ORTHO05D000089 3.1e-09 66.2 135 31.1
Oeu007623.1 Olea europaea HOM05D000101 ORTHO05D000089 6.8e-09 65.1 178 29.2
Haze_04741 Corylus avellana HOM05D000092 ORTHO05D000089 8.9e-09 64.7 135 28.1
QL04p096475 Quercus lobata HOM05D000101 ORTHO05D000089 1.2e-08 64.3 127 34.6
Oeu007621.1 Olea europaea HOM05D000101 ORTHO05D000089 1.5e-08 63.9 178 28.1
RcHm_v2.0_Chr5g0037231 Rosa chinensis HOM05D000092 ORTHO05D000089 1.5e-08 63.9 185 26.5
Hma1.2p1_2204F.1_g317110 Hydrangea macrophylla HOM05D000092 ORTHO05D000089 2.6e-08 63.2 177 26.0
FAN11G2959 Fragaria x ananassa HOM05D000092 ORTHO05D000089 5.8e-08 62.0 185 25.4
Haze_27601 Corylus avellana HOM05D000101 ORTHO05D012848 7.5e-08 61.6 152 27.0
Peaxi162Scf00357g00052 Petunia axillaris HOM05D000101 ORTHO05D000089 7.5e-08 61.6 140 31.4
Cfa020422 Carpinus fangiana HOM05D000101 ORTHO05D012848 9.8e-08 61.2 136 29.4
CiPaw.01G043000 Carya illinoinensis HOM05D000101 ORTHO05D000089 1.3e-07 60.8 179 27.4
THA.LOC104799889 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 1.3e-07 60.8 184 26.1
Hma1.2p1_2028F.1_g311690 Hydrangea macrophylla HOM05D000092 ORTHO05D000089 1.7e-07 60.5 185 23.8
MBI18_g17472_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 2.2e-07 60.1 148 23.6
TWI38G0290 Tripterygium wilfordii HOM05D000092 ORTHO05D000089 2.2e-07 60.1 172 25.6
Haze_09271 Corylus avellana HOM05D000101 ORTHO05D000089 3.7e-07 59.3 135 26.7
Peaxi162Scf01038g00113 Petunia axillaris HOM05D000092 ORTHO05D000089 6.4e-07 58.5 153 30.1
Sopen07g005680 Solanum pennellii HOM05D000101 ORTHO05D011739 1.1e-06 57.8 40 67.5
CAN.G137.47 Capsicum annuum HOM05D000101 ORTHO05D000089 1.9e-06 57.0 36 77.8
Haze_09597 Corylus avellana HOM05D000101 ORTHO05D000089 1.9e-06 57.0 152 26.3
Cfa020419 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.4e-06 56.6 178 26.4
QL03p002643 Quercus lobata HOM05D000092 ORTHO05D000042 7.0e-06 55.1 139 26.6


User provided reference genes

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