Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g013807.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 3.6e-102 374.8 174 100.0
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 4.8e-46 188.3 184 55.4
Peaxi162Scf00185g00820 Petunia axillaris HOM05D009844 ORTHO05D007252 2.6e-44 182.6 183 55.7
Peaxi162Scf00185g00710 Petunia axillaris HOM05D009844 ORTHO05D007252 5.9e-44 181.4 168 57.1
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 4.7e-41 171.8 185 50.8
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 1.4e-40 170.2 191 51.8
Peaxi162Scf00129g01225 Petunia axillaris HOM05D009844 ORTHO05D007252 2.8e-38 162.5 184 51.1
PGSC0003DMG400036554 Solanum tuberosum HOM05D009844 ORTHO05D007252 2.8e-38 162.5 184 47.8
Solyc09g092540.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 1.1e-37 160.6 184 46.7
Sopen09g035440 Solanum pennellii HOM05D009844 ORTHO05D007252 3.1e-37 159.1 184 46.2
PGSC0003DMG400021626 Solanum tuberosum HOM05D009844 ORTHO05D007252 3.6e-33 145.6 188 45.2
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 1.8e-32 143.3 192 45.3
Solyc09g098350.4 Solanum lycopersicum HOM05D009844 ORTHO05D007252 3.4e-31 139.0 188 44.7
CAN.G1325.7 Capsicum annuum HOM05D009844 ORTHO05D007252 1.7e-30 136.7 170 46.5
CAN.G628.68 Capsicum annuum HOM05D009844 ORTHO05D007252 3.5e-28 129.0 132 51.5
Nitab4.5_0000697g0050 Nicotiana tabacum HOM05D009844 ORTHO05D007252 3.6e-17 92.4 157 40.8
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 3.0e-16 89.4 164 34.1
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 4.0e-16 89.0 178 36.0
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 4.0e-16 89.0 178 36.0
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.4e-15 85.9 157 39.5
Peaxi162Scf01024g00012 Petunia axillaris HOM05D009844 ORTHO05D007252 5.8e-15 85.1 119 44.5
Peaxi162Scf00783g00227 Petunia axillaris HOM05D009844 ORTHO05D007252 7.5e-15 84.7 177 36.2
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-13 80.5 155 34.2
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-13 80.5 166 31.9
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-13 80.5 175 33.1
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 2.4e-13 79.7 181 32.6
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.4e-13 79.7 169 33.1
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.4e-13 79.7 172 30.8
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.1e-13 79.0 155 34.2
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-12 77.4 155 32.3
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-12 77.0 178 34.3
Peaxi162Scf00538g00115 Petunia axillaris HOM05D009844 ORTHO05D007252 4.6e-12 75.5 86 48.8
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 4.6e-12 75.5 183 30.6
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 6.0e-12 75.1 159 32.7
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 7.8e-12 74.7 180 27.2
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 7.8e-12 74.7 163 30.7
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 7.8e-12 74.7 183 30.6
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.7e-11 73.6 166 33.1
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.7e-11 73.6 179 30.7
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 2.3e-11 73.2 169 29.0
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 2.3e-11 73.2 161 31.1
Cpa.g.sc3466.1 Carica papaya HOM05D000007 ORTHO05D007252 3.0e-11 72.8 170 31.2
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.9e-11 72.4 174 28.2
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 5.0e-11 72.0 162 30.9
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 5.0e-11 72.0 163 30.7
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 1.5e-10 70.5 154 30.5
Peaxi162Scf00324g00823 Petunia axillaris HOM05D013374 ORTHO05D013933 3.3e-10 69.3 188 30.3
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.3e-10 68.9 153 30.1
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.3e-10 68.9 180 29.4
Sopen07g005170 Solanum pennellii HOM05D000013 ORTHO05D013933 5.6e-10 68.6 163 31.3
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.6e-10 68.6 172 26.2
Peaxi162Scf00324g00083 Petunia axillaris HOM05D013374 ORTHO05D013933 7.3e-10 68.2 168 32.7
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 9.5e-10 67.8 158 26.6
PGSC0003DMG400008522 Solanum tuberosum HOM05D013374 ORTHO05D013933 1.2e-09 67.4 166 31.3
Thecc.02G329300 Theobroma cacao HOM05D013022 ORTHO05D007252 2.1e-09 66.6 159 30.2
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-09 66.6 155 29.7
TAR633G1810 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.1e-09 66.6 171 31.0
Solyc07g009430.1 Solanum lycopersicum HOM05D013374 ORTHO05D013933 2.8e-09 66.2 163 30.7
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 4.7e-09 65.5 169 30.8
Lj4A648G14 Lonicera japonica HOM05D013022 ORTHO05D007252 8.0e-09 64.7 165 28.5
Lj4A650T22 Lonicera japonica HOM05D013022 ORTHO05D007252 8.0e-09 64.7 165 28.5
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.0e-09 64.7 127 28.3
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.8e-08 63.5 165 30.3
SGA_v2.0_scaffold13G06731 Striga asiatica HOM05D000007 ORTHO05D007252 1.8e-08 63.5 155 29.0
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 2.3e-08 63.2 160 30.0
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 5.2e-08 62.0 161 29.8
TAR633G1037 Trochodendron aralioides HOM05D007726 ORTHO05D008819 5.2e-08 62.0 164 29.3
Duzib211G0565 Durio zibethinus HOM05D000007 ORTHO05D000521 6.8e-08 61.6 184 27.7
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.5e-07 60.5 175 29.7
Nitab4.5_0000762g0110 Nicotiana tabacum HOM05D013374 ORTHO05D013933 2.0e-07 60.1 160 28.1
Nitab4.5_0008073g0040 Nicotiana tabacum HOM05D009844 ORTHO05D007252 2.0e-07 60.1 60 50.0
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 2.6e-07 59.7 167 30.5
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.4e-07 59.3 167 25.7
Aqoxy4G00884 Aquilegia oxysepala HOM05D015266 ORTHO05D000676 5.8e-07 58.5 158 26.6
CAN.G921.4 Capsicum annuum HOM05D013374 ORTHO05D013933 5.8e-07 58.5 164 28.7
MD10G1202200 Malus domestica HOM05D000007 ORTHO05D000017 5.8e-07 58.5 125 28.0
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.3e-06 57.4 176 28.4
TAR633G2355 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.3e-06 57.4 152 27.6
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.7e-06 57.0 114 27.2
FvH4_4g32891 Fragaria vesca HOM05D000007 ORTHO05D005026 3.7e-06 55.8 143 31.5
Prupe.4G140000 Prunus persica HOM05D000007 ORTHO05D000017 3.7e-06 55.8 149 26.8
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 4.9e-06 55.5 114 30.7


User provided reference genes

Program Settings