Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g008470.2 Solanum lycopersicum HOM05D000928 ORTHO05D391233 1.8e-35 152.1 82 100.0
Sopen08g004320 Solanum pennellii HOM05D000928 ORTHO05D001186 1.7e-33 145.6 82 97.6
PGSC0003DMG400005847 Solanum tuberosum HOM05D000928 ORTHO05D001186 1.4e-32 142.5 82 92.7
Sopen08g004310 Solanum pennellii HOM05D000928 ORTHO05D001186 2.2e-25 118.6 82 82.9
Peaxi162Scf00074g00425 Petunia axillaris HOM05D000928 ORTHO05D001186 1.1e-19 99.8 84 71.4
PGSC0003DMG400012131 Solanum tuberosum HOM05D000928 ORTHO05D001186 1.8e-19 99.0 84 73.8
Nitab4.5_0002367g0190 Nicotiana tabacum HOM05D000928 ORTHO05D001186 3.4e-18 94.7 84 69.0
Nitab4.5_0002439g0010 Nicotiana tabacum HOM05D000928 ORTHO05D001186 3.4e-18 94.7 84 69.0
Dinv13242 Davidia involucrata HOM05D000928 ORTHO05D001186 7.1e-16 87.0 84 66.7
Cc08_g16420 Coffea canephora HOM05D000928 ORTHO05D001186 1.2e-15 86.3 84 64.3
TAR374G1669 Trochodendron aralioides HOM05D000928 ORTHO05D001186 3.5e-15 84.7 82 64.6
Peaxi162Scf00102g01857 Petunia axillaris HOM05D000928 ORTHO05D001186 4.6e-15 84.3 84 66.7
DCAR_006507 Daucus carota HOM05D000928 ORTHO05D001186 6.0e-15 84.0 82 67.1
TAR629G2958 Trochodendron aralioides HOM05D000928 ORTHO05D001186 1.1e-13 79.7 82 61.0
CSS0030761 Camellia sinensis var. sinensis HOM05D000928 ORTHO05D001186 7.4e-13 77.0 84 61.9
CSS0040018 Camellia sinensis var. sinensis HOM05D000928 ORTHO05D001186 7.4e-13 77.0 84 61.9
Actinidia22736 Actinidia chinensis HOM05D000928 ORTHO05D001186 9.6e-13 76.6 84 61.9
Oeu055024.1 Olea europaea HOM05D000928 ORTHO05D001186 6.2e-12 73.9 84 60.7
TAR375G1149 Trochodendron aralioides HOM05D000928 ORTHO05D001186 6.2e-12 73.9 83 60.2
Actinidia14162 Actinidia chinensis HOM05D000928 ORTHO05D001186 1.1e-11 73.2 84 59.5
Hma1.2p1_0440F.1_g153620 Hydrangea macrophylla HOM05D000928 ORTHO05D001186 1.3e-09 66.2 85 58.8
Lj8C204G3 Lonicera japonica HOM05D000928 ORTHO05D001186 8.4e-09 63.5 84 58.3
ECA246G4904 Erigeron canadensis HOM05D000928 ORTHO05D001186 1.4e-08 62.8 85 54.1
Migut.E00646 Erythranthe guttata HOM05D000928 ORTHO05D001186 3.2e-08 61.6 85 56.5
vmacro13874 Vaccinium macrocarpon HOM05D000928 ORTHO05D001186 7.1e-08 60.5 84 53.6
QL02p029371 Quercus lobata HOM05D000928 ORTHO05D024589 8.7e-06 53.5 80 53.8
QL02p029582 Quercus lobata HOM05D000928 ORTHO05D001186 8.7e-06 53.5 80 53.8


User provided reference genes

Program Settings