Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g006570.4 Solanum lycopersicum HOM05D007316 ORTHO05D009393 3.4e-42 174.5 81 100.0
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 4.1e-16 87.8 41 97.6
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 1.2e-15 86.3 41 95.1
CAN.G530.4 Capsicum annuum HOM05D007316 ORTHO05D009393 2.3e-14 82.0 47 78.7
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 3.7e-09 64.7 37 78.4
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 3.7e-09 64.7 37 78.4
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 1.9e-08 62.4 37 75.7
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 3.2e-08 61.6 37 75.7
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 4.1e-08 61.2 35 77.1
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 5.4e-08 60.8 37 70.3
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 5.4e-08 60.8 37 70.3
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 7.1e-08 60.5 36 72.2
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.2e-07 59.7 39 66.7
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.5e-07 58.2 38 65.8
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.5e-07 58.2 38 65.8
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 3.5e-07 58.2 35 74.3
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 3.5e-07 58.2 35 74.3
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 3.5e-07 58.2 35 71.4
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 4.6e-07 57.8 35 68.6
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 6.0e-07 57.4 39 64.1
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 6.0e-07 57.4 35 71.4
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 6.0e-07 57.4 37 73.0
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 7.8e-07 57.0 36 66.7
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 7.8e-07 57.0 36 66.7
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 7.8e-07 57.0 36 66.7
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 7.8e-07 57.0 36 66.7
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 74.3
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 7.8e-07 57.0 35 71.4
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 1.0e-06 56.6 37 73.0
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 1.0e-06 56.6 34 70.6
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 1.0e-06 56.6 35 71.4
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.0e-06 56.6 35 68.6
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 1.3e-06 56.2 37 67.6
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 1.3e-06 56.2 35 71.4
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 1.3e-06 56.2 35 68.6
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 1.7e-06 55.8 35 68.6
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 2.3e-06 55.5 34 73.5
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 2.3e-06 55.5 35 68.6
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 2.3e-06 55.5 35 68.6
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 2.3e-06 55.5 36 63.9
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 3.0e-06 55.1 35 65.7
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 3.9e-06 54.7 35 68.6
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 3.9e-06 54.7 35 68.6
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 5.1e-06 54.3 35 65.7
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 8.6e-06 53.5 37 67.6
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 8.6e-06 53.5 37 64.9
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 8.6e-06 53.5 34 70.6


User provided reference genes

Program Settings