Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 3.2e-122 441.8 227 100.0
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 9.5e-119 430.3 227 97.4
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 1.1e-109 400.2 214 95.3
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 2.6e-108 395.6 228 89.9
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 3.7e-107 391.7 228 89.0
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 4.9e-107 391.3 227 87.7
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 4.9e-107 391.3 228 88.6
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 9.2e-106 387.1 228 87.7
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 7.3e-103 377.5 227 85.5
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 4.7e-102 374.8 227 82.8
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 8.1e-102 374.0 214 88.3
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 8.9e-101 370.5 227 82.8
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 1.2e-100 370.2 227 82.8
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 1.2e-100 370.2 222 83.3
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 1.5e-100 369.8 227 81.5
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.6e-100 369.0 227 81.5
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 3.4e-100 368.6 227 81.9
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 4.4e-100 368.2 227 81.9
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 4.4e-100 368.2 227 80.6
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 5.8e-100 367.9 227 82.4
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 5.8e-100 367.9 227 82.8
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 7.6e-100 367.5 227 82.4
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 9.9e-100 367.1 227 81.5
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 1.3e-99 366.7 227 81.5
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 2.9e-99 365.5 223 83.4
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 2.9e-99 365.5 219 83.6
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 2.9e-99 365.5 227 81.9
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 3.8e-99 365.2 227 80.2
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 4.9e-99 364.8 227 79.7
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 6.4e-99 364.4 227 80.6
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 6.4e-99 364.4 227 81.5
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 6.4e-99 364.4 227 79.3
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 1.4e-98 363.2 228 82.0
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 1.9e-98 362.8 219 84.0
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 1.9e-98 362.8 227 78.9
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 1.9e-98 362.8 227 79.7
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 2.4e-98 362.5 227 80.2
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 2.4e-98 362.5 229 80.8
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 2.4e-98 362.5 227 81.1
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 3.2e-98 362.1 226 81.0
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 3.2e-98 362.1 227 79.3
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 4.2e-98 361.7 227 80.6
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 4.2e-98 361.7 227 81.5
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 5.4e-98 361.3 227 82.4
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 5.4e-98 361.3 228 80.7
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 7.1e-98 360.9 222 81.5
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 7.1e-98 360.9 227 80.2
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 1.2e-97 360.1 227 79.7
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 1.2e-97 360.1 227 80.2
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 1.2e-97 360.1 229 80.8
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 1.6e-97 359.8 229 80.8
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 2.1e-97 359.4 227 78.9
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 3.5e-97 358.6 227 79.3
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 4.6e-97 358.2 227 79.7
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 4.6e-97 358.2 227 78.9
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 6.0e-97 357.8 227 79.3
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 7.8e-97 357.5 226 79.2
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 7.8e-97 357.5 227 78.0
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 7.8e-97 357.5 227 78.4
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 1.0e-96 357.1 227 78.9
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.3e-96 356.7 227 77.1
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 1.3e-96 356.7 227 79.3
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.3e-96 356.7 227 78.9
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 1.7e-96 356.3 226 79.2
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 1.7e-96 356.3 220 80.5
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 3.0e-96 355.5 226 79.6
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 3.9e-96 355.1 226 78.8
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 3.9e-96 355.1 227 78.9
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 2.5e-95 352.4 232 77.2
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 3.3e-95 352.1 227 79.7
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 3.3e-95 352.1 227 79.7
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 3.3e-95 352.1 233 77.7
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 5.6e-95 351.3 227 79.7
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 5.6e-95 351.3 227 78.9
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 5.6e-95 351.3 219 80.4
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 7.3e-95 350.9 227 79.3
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 7.3e-95 350.9 218 82.1
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 1.3e-94 350.1 227 77.5
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 1.3e-94 350.1 227 77.1
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.6e-94 348.6 218 82.6
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 3.6e-94 348.6 227 78.0
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 4.8e-94 348.2 227 77.5
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 4.8e-94 348.2 227 78.9
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 4.8e-94 348.2 214 81.8
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 6.2e-94 347.8 227 78.0
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 6.2e-94 347.8 222 79.3
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 6.2e-94 347.8 224 79.5
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 2.4e-93 345.9 207 83.6
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 3.1e-93 345.5 228 78.5
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 4.0e-93 345.1 214 79.4
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 5.3e-93 344.7 218 79.8
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 9.0e-93 344.0 228 78.5
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 9.0e-93 344.0 228 78.1
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 3.4e-92 342.0 227 76.2
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 4.4e-92 341.7 214 77.6
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 5.8e-92 341.3 227 74.0
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 5.8e-92 341.3 214 80.8
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 7.6e-92 340.9 217 78.8
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 9.9e-92 340.5 215 78.6
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 4.9e-91 338.2 214 79.0
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 6.4e-91 337.8 203 84.2
Psat2g184920 Pisum sativum HOM05D004770 ORTHO05D005572 1.1e-90 337.0 265 67.2
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 1.4e-90 336.7 209 80.9
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 4.2e-90 335.1 206 80.1
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 5.4e-90 334.7 205 82.0
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 5.4e-90 334.7 213 77.5
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 1.6e-89 333.2 191 88.0
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 1.0e-88 330.5 214 77.1
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 2.3e-88 329.3 214 78.5
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 3.9e-88 328.6 225 75.6
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 5.6e-87 324.7 227 76.7
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 2.1e-86 322.8 202 82.2
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 3.6e-86 322.0 227 71.4
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 6.2e-86 321.2 214 76.2
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 2.0e-84 316.2 228 73.2
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.7e-83 313.2 221 72.4
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 7.1e-82 307.8 195 78.5
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 1.6e-78 296.6 190 77.4
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.0e-75 287.3 195 73.3
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 4.9e-75 285.0 214 67.3
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 1.1e-74 283.9 183 80.3
Pp3c15_20330 Physcomitrium patens HOM05D004770 ORTHO05D005572 4.3e-71 271.9 214 64.5
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 5.7e-71 271.6 230 62.2
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 9.6e-71 270.8 164 82.9
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis HOM05D004770 ORTHO05D005572 1.5e-68 263.5 209 64.6
CSS0010466 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 4.5e-68 261.9 229 64.2
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 1.6e-65 253.4 197 70.1
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 4.6e-65 251.9 164 77.4
Manes.05G078700 Manihot esculenta HOM05D004770 ORTHO05D005572 6.1e-65 251.5 227 62.6
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 7.9e-65 251.1 193 69.9
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 5.7e-63 245.0 160 77.5
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 3.7e-62 242.3 163 73.0
CBR_g40454 Chara braunii HOM05D004770 ORTHO05D005572 1.0e-59 234.2 237 52.7
Sc05g0001180 Simmondsia chinensis HOM05D004770 ORTHO05D005572 2.5e-58 229.6 153 72.5
Lsat_1_v5_gn_3_83521 Lactuca sativa HOM05D004770 ORTHO05D005572 3.0e-56 222.6 154 74.7
MCO10G359 Micromonas commoda HOM05D004770 ORTHO05D005572 2.4e-53 213.0 215 51.6
SHI22269 Sapria himalayana HOM05D004770 ORTHO05D005572 1.7e-51 206.8 131 77.1
Psat6g025640 Pisum sativum HOM05D004770 ORTHO05D005572 2.5e-50 203.0 193 60.1
Zm00001eb031460 Zea mays HOM05D004770 ORTHO05D005572 2.3e-40 169.9 100 81.0
RcHm_v2.0_Chr3g0476231 Rosa chinensis HOM05D004770 ORTHO05D005572 3.7e-38 162.5 108 75.0
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.5e-36 156.0 115 70.4
Actinidia21133 Actinidia chinensis HOM05D004770 ORTHO05D005572 2.4e-29 133.3 109 66.1
Zm00001eb432290 Zea mays HOM05D004770 ORTHO05D005572 2.7e-28 129.8 92 68.5
Actinidia21134 Actinidia chinensis HOM05D004770 ORTHO05D005572 4.2e-26 122.5 87 67.8
Glyma.02G191000 Glycine max HOM05D004770 ORTHO05D005572 4.7e-25 119.0 135 51.9
TAR633G1205 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.3e-22 110.9 112 56.2
CDE04G0604 Ceratophyllum demersum HOM05D004770 ORTHO05D005572 9.5e-18 94.7 63 68.3
TAR633G0687 Trochodendron aralioides HOM05D004770 ORTHO05D005572 8.0e-17 91.7 51 88.2
TAR636G2941 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.0e-16 91.3 97 52.6
AT1G08120 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 1.4e-13 80.9 70 62.9
GSVIVG01020385001 Vitis vinifera HOM05D004770 ORTHO05D005572 5.6e-10 68.9 114 41.2
Cre06.g306800 Chlamydomonas reinhardtii HOM05D004770 ORTHO05D005572 2.8e-09 66.6 138 33.3
BcaC03g17841 Brassica carinata HOM05D004770 ORTHO05D005572 1.0e-08 64.7 68 51.5
GSVIVG01017585001 Vitis vinifera HOM05D004770 ORTHO05D005572 8.9e-08 61.6 63 55.6
Pp3c15_16340 Physcomitrium patens HOM05D000088 ORTHO05D001217 5.8e-07 58.9 153 30.1
Pp3c9_16610 Physcomitrium patens HOM05D000088 ORTHO05D001217 7.5e-07 58.5 153 29.4


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