Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 2.6e-142 508.8 279 100.0
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 3.2e-92 342.4 236 82.2
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.2e-86 323.9 238 83.2
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 5.9e-70 268.5 236 69.9
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.8e-55 220.3 183 73.2
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 1.0e-45 188.0 244 52.5
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 8.8e-42 174.9 240 52.1
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 8.8e-42 174.9 251 51.0
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 3.4e-41 172.9 238 49.6
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.1e-39 167.9 185 65.9
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 1.2e-38 164.5 241 53.1
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 6.6e-37 158.7 256 50.8
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 9.5e-36 154.8 243 51.9
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 6.8e-34 148.7 191 51.8
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.7e-32 144.1 215 50.7
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 5.4e-31 139.0 236 47.9
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 4.6e-30 136.0 247 43.3
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 7.8e-30 135.2 247 47.4
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 1.7e-29 134.0 244 45.1
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.9e-28 130.6 257 42.8
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.9e-28 130.6 247 42.1
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.5e-28 130.2 246 42.3
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.5e-28 130.2 244 45.1
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 3.3e-28 129.8 257 42.0
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 1.6e-27 127.5 254 40.9
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 2.1e-27 127.1 266 44.7
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 3.6e-27 126.3 255 42.0
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 4.7e-27 125.9 239 41.4
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.8e-26 124.0 259 39.4
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 8.9e-26 121.7 240 42.1
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 3.4e-25 119.8 242 41.3
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 3.4e-25 119.8 253 45.5
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 4.4e-25 119.4 240 44.2
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 5.8e-25 119.0 236 44.5
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 7.5e-25 118.6 261 41.0
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 7.5e-25 118.6 239 45.6
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.7e-24 117.5 246 43.1
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.2e-24 117.1 244 41.0
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 4.9e-24 115.9 244 40.6
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 4.9e-24 115.9 241 41.1
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 8.3e-24 115.2 259 42.9
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 3.2e-23 113.2 248 41.9
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 5.4e-23 112.5 258 42.6
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.2e-22 111.3 241 43.2
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 4.6e-22 109.4 246 41.5
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 1.0e-21 108.2 241 40.2
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 3.0e-21 106.7 269 39.0
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 3.9e-21 106.3 241 42.3
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.1e-20 104.8 243 42.8
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 2.5e-20 103.6 259 38.6
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.3e-20 102.8 239 37.7
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 9.5e-20 101.7 238 39.5
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 1.6e-19 100.9 247 40.9
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.6e-19 99.8 213 45.1
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.8e-18 97.4 244 39.8
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 5.2e-18 95.9 235 38.3
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 5.2e-18 95.9 253 37.9
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 8.9e-18 95.1 275 34.9
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 1.5e-17 94.4 241 39.0
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.5e-17 94.4 232 39.2
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 2.0e-17 94.0 237 37.6
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 2.2e-16 90.5 231 36.4
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.2e-16 90.5 229 37.6
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.4e-15 87.8 244 36.9
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.9e-15 87.4 245 34.7
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 3.2e-15 86.7 247 40.1
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 9.2e-15 85.1 237 35.4
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 3.5e-14 83.2 240 38.3
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 2.3e-13 80.5 186 43.5
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 3.0e-13 80.1 250 34.8
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 3.9e-13 79.7 109 46.8
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-12 78.2 240 35.4
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.1e-12 78.2 240 35.4
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.1e-12 78.2 240 35.4
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.5e-12 77.8 247 40.1
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.9e-12 77.4 209 34.0
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 2.5e-12 77.0 240 35.0
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 5.6e-12 75.9 157 42.7
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.6e-11 74.3 240 35.4
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.1e-11 73.9 236 32.2
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.6e-11 73.2 236 39.0
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 4.7e-11 72.8 241 36.1
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.4e-10 71.2 190 38.9
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 2.4e-10 70.5 249 32.1
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 3.1e-10 70.1 238 34.9
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 4.0e-10 69.7 239 34.7
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 4.0e-10 69.7 243 32.9
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 8.9e-10 68.6 230 35.2
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 1.5e-09 67.8 239 34.7
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 4.9e-08 62.8 183 39.3
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 8.4e-08 62.0 231 33.8
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 1.4e-07 61.2 127 40.2
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 3.2e-07 60.1 123 45.5


User provided reference genes

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