Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g066530.4 Solanum lycopersicum HOM05D006651 ORTHO05D008231 9.3e-82 307.0 174 100.0
Sopen07g034690 Solanum pennellii HOM05D006651 ORTHO05D008231 1.3e-80 303.1 174 98.9
PGSC0003DMG400022122 Solanum tuberosum HOM05D006651 ORTHO05D008231 1.2e-76 290.0 177 94.4
CAN.G943.45 Capsicum annuum HOM05D006651 ORTHO05D008231 3.8e-59 231.9 181 77.9
Nitab4.5_0002633g0010 Nicotiana tabacum HOM05D006651 ORTHO05D008231 1.6e-49 199.9 179 73.2
Nitab4.5_0002321g0030 Nicotiana tabacum HOM05D006651 ORTHO05D008231 4.7e-49 198.4 178 71.3
Peaxi162Scf00452g00625 Petunia axillaris HOM05D006651 ORTHO05D008231 1.3e-46 190.3 174 71.8
Oeu031998.1 Olea europaea HOM05D006651 ORTHO05D008231 1.6e-44 183.3 180 64.4
Dinv19605 Davidia involucrata HOM05D006651 ORTHO05D008231 2.5e-42 176.0 187 61.5
Cc05_g16240 Coffea canephora HOM05D006651 ORTHO05D008231 2.6e-39 166.0 185 65.9
SalBow8G4165 Salvia bowleyana HOM05D006651 ORTHO05D008231 3.3e-39 165.6 193 59.6
AUR62044139 Chenopodium quinoa HOM05D006651 ORTHO05D008231 2.4e-37 159.5 177 56.5
Lj3g0020848 Lotus japonicus HOM05D006651 ORTHO05D008231 4.1e-37 158.7 203 54.7
SGA_v2.0_scaffold186G40208 Striga asiatica HOM05D006651 ORTHO05D008231 5.3e-37 158.3 193 59.1
MSTRG.14550 Avicennia marina HOM05D006651 ORTHO05D008231 7.0e-37 157.9 188 59.6
TWI38G1376 Tripterygium wilfordii HOM05D006651 ORTHO05D008231 7.0e-37 157.9 203 53.7
CSS0038434 Camellia sinensis var. sinensis HOM05D006651 ORTHO05D008231 2.0e-36 156.4 181 59.1
CSS0049056 Camellia sinensis var. sinensis HOM05D006651 ORTHO05D008231 2.0e-36 156.4 181 59.1
Actinidia12777 Actinidia chinensis HOM05D006651 ORTHO05D008231 4.5e-36 155.2 186 57.5
Psat1g003600 Pisum sativum HOM05D006651 ORTHO05D008231 7.7e-36 154.5 202 52.5
Sp1g41740 Schrenkiella parvula HOM05D006651 ORTHO05D008231 1.7e-35 153.3 178 60.1
Hma1.2p1_0933F.1_g238380 Hydrangea macrophylla HOM05D006651 ORTHO05D008231 3.8e-35 152.1 186 59.1
Rhsim06G0240200 Rhododendron simsii HOM05D006651 ORTHO05D008231 3.2e-34 149.1 184 57.6
Cpa.g.sc468.1 Carica papaya HOM05D006651 ORTHO05D008231 2.1e-33 146.4 215 49.3
CiPaw.01G120000 Carya illinoinensis HOM05D006651 ORTHO05D008231 2.1e-33 146.4 207 53.6
MD05G1222700 Malus domestica HOM05D006651 ORTHO05D008231 2.1e-33 146.4 212 50.5
Manes.06G174200 Manihot esculenta HOM05D006651 ORTHO05D008231 2.1e-33 146.4 226 50.0
Ah.16g106470 Amaranthus hybridus HOM05D006651 ORTHO05D008231 2.7e-33 146.0 183 55.7
Phvul.005G050600 Phaseolus vulgaris HOM05D006651 ORTHO05D008231 2.7e-33 146.0 205 51.7
BcaB04g16920 Brassica carinata HOM05D001386 ORTHO05D004014 3.6e-33 145.6 180 56.7
Carub.0001s4469 Capsella rubella HOM05D006651 ORTHO05D008231 3.6e-33 145.6 194 52.1
MD10G1204300 Malus domestica HOM05D006651 ORTHO05D008231 3.6e-33 145.6 215 50.7
CiPaw.02G065800 Carya illinoinensis HOM05D006651 ORTHO05D008231 1.0e-32 144.1 208 53.4
Glyma.08G168700 Glycine max HOM05D006651 ORTHO05D008231 1.0e-32 144.1 206 52.9
BolC3t21637H Brassica oleracea HOM05D006651 ORTHO05D008231 1.8e-32 143.3 180 56.1
CARHR045820 Cardamine hirsuta HOM05D006651 ORTHO05D008231 1.8e-32 143.3 186 58.1
C03p93400 Brassica napus HOM05D006651 ORTHO05D008231 2.3e-32 142.9 181 56.9
Lalb_Chr25g0284841 Lupinus albus HOM05D006651 ORTHO05D008231 3.0e-32 142.5 201 54.7
Atru.chr1.194 Acer truncatum HOM05D006651 ORTHO05D008231 4.0e-32 142.1 218 52.8
Aa31LG10G160 Aethionema arabicum HOM05D006651 ORTHO05D008231 5.2e-32 141.7 215 51.2
CDE04G2116 Ceratophyllum demersum HOM05D006651 ORTHO05D008231 5.2e-32 141.7 184 52.2
DCAR_019927 Daucus carota HOM05D006651 ORTHO05D008231 5.2e-32 141.7 205 52.7
AL1G64350 Arabidopsis lyrata HOM05D006651 ORTHO05D008231 6.8e-32 141.4 191 51.8
TAR626G0823 Trochodendron aralioides HOM05D006651 ORTHO05D008231 6.8e-32 141.4 206 52.9
Lsat_1_v5_gn_7_111741 Lactuca sativa HOM05D006651 ORTHO05D008231 8.8e-32 141.0 185 56.2
Prupe.4G137600 Prunus persica HOM05D006651 ORTHO05D008231 8.8e-32 141.0 210 50.0
MBI14_g16769_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 1.2e-31 140.6 196 48.5
AT1G56090 Arabidopsis thaliana HOM05D006651 ORTHO05D008231 1.5e-31 140.2 202 53.0
arahy.Tifrunner.gnm1.ann1.41FYNA Arachis hypogaea HOM05D006651 ORTHO05D008231 3.4e-31 139.0 208 49.5
Actinidia07365 Actinidia chinensis HOM05D006651 ORTHO05D008231 5.7e-31 138.3 186 55.9
ECA236G4704 Erigeron canadensis HOM05D006651 ORTHO05D008231 7.5e-31 137.9 193 54.9
Migut.H01683 Erythranthe guttata HOM05D006651 ORTHO05D008231 9.8e-31 137.5 196 51.5
FAN16G3403 Fragaria x ananassa HOM05D006651 ORTHO05D008231 2.2e-30 136.3 221 49.3
PGR004G2050 Punica granatum HOM05D006651 ORTHO05D008231 4.8e-30 135.2 212 44.3
HPP92_020506 Vanilla planifolia HOM05D006651 ORTHO05D008231 4.8e-30 135.2 176 52.8
Ciclev10005569m.g Citrus clementina HOM05D006651 ORTHO05D008231 6.3e-30 134.8 206 51.5
CsaV3_6G013610 Cucumis sativus L. HOM05D006651 ORTHO05D008231 8.3e-30 134.4 210 50.0
SEGI_26280 Sequoiadendron giganteum HOM05D006651 ORTHO05D008231 1.1e-29 134.0 174 51.7
MBI14_g38409_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 1.8e-29 133.3 199 49.2
Hund20096 Selenicereus undatus HOM05D006651 ORTHO05D008231 1.8e-29 133.3 228 46.9
Nn7g37920 Nelumbo nucifera HOM05D006651 ORTHO05D008231 4.1e-29 132.1 187 54.5
TPR.G33804 Trifolium pratense HOM05D006651 ORTHO05D008231 4.1e-29 132.1 175 51.4
MELO3C019651.2 Cucumis melo HOM05D006651 ORTHO05D008231 5.4e-29 131.7 211 48.3
arahy.Tifrunner.gnm1.ann1.JFLR83 Arachis hypogaea HOM05D006651 ORTHO05D008231 7.0e-29 131.3 202 48.5
Os04g0616100 Oryza sativa ssp. japonica HOM05D006651 ORTHO05D008231 7.0e-29 131.3 199 49.2
ClCG02G018590 Citrullus lanatus HOM05D006651 ORTHO05D008231 9.1e-29 131.0 211 47.9
FAN25G3348 Fragaria x ananassa HOM05D006651 ORTHO05D008231 1.2e-28 130.6 213 49.3
Thhalv10011720m.g Eutrema salsugineum HOM05D006651 ORTHO05D008231 1.6e-28 130.2 185 51.9
Lj1A907T22 Lonicera japonica HOM05D006651 ORTHO05D008231 1.6e-28 130.2 197 54.3
Ca_03654_v3 Cicer arietinum L. HOM05D006651 ORTHO05D008231 2.0e-28 129.8 192 53.1
Glyma.15G258500 Glycine max HOM05D006651 ORTHO05D008231 2.0e-28 129.8 205 47.3
Eucgr.F04427 Eucalyptus grandis HOM05D006651 ORTHO05D008231 2.7e-28 129.4 217 48.4
A08p00100 Brassica napus HOM05D006651 ORTHO05D008231 3.5e-28 129.0 183 53.6
BraA08t32067Z Brassica rapa HOM05D006651 ORTHO05D008231 3.5e-28 129.0 183 53.6
FAN21G3142 Fragaria x ananassa HOM05D006651 ORTHO05D008231 4.5e-28 128.6 213 48.4
Sed0018431 Sechium edule HOM05D006651 ORTHO05D008231 7.7e-28 127.9 212 49.5
FvH4_3g15510 Fragaria vesca HOM05D006651 ORTHO05D008231 1.0e-27 127.5 213 48.4
FAN11G0473 Fragaria x ananassa HOM05D006651 ORTHO05D008231 1.0e-27 127.5 213 48.4
EL10Ac2g03282 Beta vulgaris HOM05D006651 ORTHO05D008231 1.3e-27 127.1 179 49.7
CANSAT80G1595 Cannabis sativa HOM05D006651 ORTHO05D008231 1.3e-27 127.1 216 47.7
RcHm_v2.0_Chr5g0026131 Rosa chinensis HOM05D006651 ORTHO05D008231 2.3e-27 126.3 206 48.5
Sabra05G0079600 Salix brachista HOM05D006651 ORTHO05D008231 3.8e-27 125.6 210 47.6
HanXRQChr11g0335031 Helianthus annuus HOM05D006651 ORTHO05D008231 5.0e-27 125.2 179 54.7
Sed0000278 Sechium edule HOM05D006651 ORTHO05D008231 5.0e-27 125.2 218 45.9
AUR62042421 Chenopodium quinoa HOM05D006651 ORTHO05D008231 6.5e-27 124.8 143 51.7
SMO365G0063 Selaginella moellendorffii HOM05D006651 ORTHO05D008231 1.1e-26 124.0 171 43.3
Cfa019412 Carpinus fangiana HOM05D006651 ORTHO05D008231 2.5e-26 122.9 216 47.2
BcaB04g16921 Brassica carinata HOM05D006651 ORTHO05D008231 7.2e-26 121.3 181 51.4
Potri.005G097300 Populus trichocarpa HOM05D006651 ORTHO05D008231 9.5e-26 120.9 230 44.8
THA.LOC104815722 Tarenaya hassleriana HOM05D006651 ORTHO05D008231 9.5e-26 120.9 210 46.2
VMungo1080G1904 Vigna mungo HOM05D006651 ORTHO05D008231 3.6e-25 119.0 209 45.5
unitig_578.g16054 Utricularia gibba HOM05D006651 ORTHO05D008231 6.1e-25 118.2 181 50.8
Gorai.009G353300 Gossypium raimondii HOM05D006651 ORTHO05D008231 8.0e-25 117.9 224 46.0
Sc09g0007630 Simmondsia chinensis HOM05D006651 ORTHO05D008231 2.3e-24 116.3 186 52.2
QL04p077146 Quercus lobata HOM05D006651 ORTHO05D008231 8.9e-24 114.4 253 40.7
ATR0763G149 Amborella trichopoda HOM05D006651 ORTHO05D008231 1.5e-23 113.6 174 49.4
Manes.14G011700 Manihot esculenta HOM05D006651 ORTHO05D008231 9.8e-23 110.9 223 41.3
MBI14_g16766_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 1.7e-22 110.2 196 43.4
Gorai.002G104800 Gossypium raimondii HOM05D006651 ORTHO05D008231 2.2e-22 109.8 237 40.5
Gohir.D01G080100 Gossypium hirsutum HOM05D006651 ORTHO05D008231 2.8e-22 109.4 237 40.1
AagrBONN_evm.TU.Sc2ySwM_117.2491 Anthoceros agrestis HOM05D006651 ORTHO05D008231 3.1e-21 105.9 167 41.3
Gohir.A01G095800 Gossypium hirsutum HOM05D006651 ORTHO05D008231 3.1e-21 105.9 237 39.7
Aqoxy1G01470 Aquilegia oxysepala HOM05D006651 ORTHO05D008231 5.4e-21 105.1 226 43.4
Thecc.07G160400 Theobroma cacao HOM05D006651 ORTHO05D008231 5.9e-20 101.7 274 36.9
Pp3c3_32820 Physcomitrium patens HOM05D006651 ORTHO05D008231 1.7e-19 100.1 173 35.8
SMO364G0850 Selaginella moellendorffii HOM05D006651 ORTHO05D008231 6.6e-19 98.2 170 38.8
Pp3c12_16150 Physcomitrium patens HOM05D006651 ORTHO05D008231 3.3e-18 95.9 169 38.5
Pp3c4_11850 Physcomitrium patens HOM05D006651 ORTHO05D008231 8.0e-17 91.3 169 39.1
Gohir.A04G051400 Gossypium hirsutum HOM05D006651 ORTHO05D008231 1.0e-16 90.9 214 42.5
Haze_07841 Corylus avellana HOM05D006651 ORTHO05D008231 1.4e-16 90.5 193 42.0
Mapoly0043s0136 Marchantia polymorpha HOM05D006651 ORTHO05D008231 3.0e-16 89.4 146 40.4
Duzib213G0371 Durio zibethinus HOM05D006651 ORTHO05D008231 4.0e-16 89.0 156 44.9
Gohir.D05G329900 Gossypium hirsutum HOM05D006651 ORTHO05D008231 4.0e-16 89.0 144 47.2
Medtr2g067870 Medicago truncatula HOM05D006651 ORTHO05D008231 1.2e-15 87.4 44 97.7
Medtr2g067860 Medicago truncatula HOM05D006651 ORTHO05D008231 1.3e-14 84.0 161 42.2
GSVIVG01020279001 Vitis vinifera HOM05D006651 ORTHO05D008231 1.8e-13 80.1 44 90.9
COL.COLO4_38369 Corchorus olitorius HOM05D006651 ORTHO05D008231 2.4e-13 79.7 44 88.6
MBI01_g45067_MAGBIO Magnolia biondii HOM05D006651 ORTHO05D008231 5.4e-13 78.6 90 48.9
Zm00001eb070740 Zea mays HOM05D006651 ORTHO05D008231 7.0e-13 78.2 44 86.4
vmacro11716 Vaccinium macrocarpon HOM05D006651 ORTHO05D008231 1.0e-11 74.3 255 33.7


User provided reference genes

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