Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 3.5e-172 608.2 311 100.0
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 2.8e-169 598.6 311 98.4
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.3e-158 563.1 311 93.2
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.9e-141 506.1 311 83.0
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 8.7e-131 470.7 312 78.2
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 2.8e-129 465.7 311 77.8
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.0e-123 445.7 287 79.1
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 5.0e-70 268.9 322 47.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 8.6e-70 268.1 331 48.0
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 1.1e-69 267.7 375 42.7
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.5e-69 267.3 333 46.8
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 7.2e-69 265.0 334 47.0
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 2.8e-68 263.1 318 47.2
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.8e-68 263.1 318 47.2
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 8.0e-68 261.5 316 46.5
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 1.8e-67 260.4 310 48.4
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 3.4e-66 256.1 374 43.0
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.1e-64 249.2 303 47.5
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 7.0e-64 248.4 326 44.2
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 7.0e-64 248.4 325 46.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.6e-63 245.7 327 45.3
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.3e-62 244.2 320 45.9
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 1.7e-62 243.8 307 49.5
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 1.7e-62 243.8 325 45.2
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 2.3e-62 243.4 331 45.6
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 3.9e-62 242.7 320 45.6
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 3.9e-62 242.7 326 45.1
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 6.6e-62 241.9 354 42.4
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.1e-61 241.1 317 43.8
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.1e-61 241.1 303 46.5
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.5e-61 240.7 354 42.7
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.3e-61 239.6 316 45.3
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 9.5e-61 238.0 376 40.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.2e-60 237.7 325 44.9
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 2.1e-60 236.9 334 45.2
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 4.0e-59 232.6 298 47.3
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.8e-59 231.9 308 44.8
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 2.0e-58 230.3 286 47.9
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 2.6e-58 229.9 376 39.4
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 2.9e-57 226.5 325 42.5
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.9e-57 226.5 173 63.6
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.9e-57 226.5 325 41.8
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 6.4e-57 225.3 335 42.1
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.9e-56 223.8 336 41.7
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 2.4e-56 223.4 336 42.0
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.4e-56 223.4 191 59.7
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 3.2e-56 223.0 344 41.6
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 1.6e-55 220.7 325 43.4
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 2.7e-55 219.9 201 58.2
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 4.6e-55 219.2 332 42.5
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.6e-55 219.2 331 42.3
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 4.6e-55 219.2 298 45.6
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 6.0e-55 218.8 246 51.6
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.0e-54 218.0 210 54.8
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 1.7e-54 217.2 309 44.0
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 2.3e-54 216.9 174 61.5
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 5.0e-54 215.7 177 62.7
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 6.6e-54 215.3 174 59.2
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 6.6e-54 215.3 172 62.2
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 8.6e-54 214.9 315 43.2
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 1.5e-53 214.2 370 37.8
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 1.5e-53 214.2 354 40.7
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.5e-53 213.4 332 41.0
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.5e-53 213.4 362 39.0
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 2.5e-53 213.4 287 46.7
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.5e-53 213.4 170 62.4
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 3.3e-53 213.0 173 61.8
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 3.3e-53 213.0 245 49.8
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 3.3e-53 213.0 281 47.0
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 4.3e-53 212.6 326 41.4
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 9.5e-53 211.5 288 45.5
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.2e-52 211.1 173 61.3
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.2e-52 211.1 173 61.3
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.2e-52 211.1 173 61.3
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 2.1e-52 210.3 270 46.3
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 2.8e-52 209.9 214 51.9
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.6e-52 209.5 348 39.7
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 6.2e-52 208.8 211 57.8
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 8.1e-52 208.4 352 37.2
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.1e-51 208.0 287 43.9
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 4.0e-51 206.1 211 56.4
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 6.8e-51 205.3 378 39.2
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 6.8e-51 205.3 268 47.0
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 7.5e-50 201.8 302 42.4
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 2.2e-49 200.3 283 45.6
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 3.7e-49 199.5 233 47.2
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 2.4e-48 196.8 172 57.0
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.1e-47 193.7 373 35.9
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 6.0e-47 192.2 196 51.0
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 7.8e-47 191.8 196 51.0
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.7e-46 190.7 308 40.3
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 3.9e-46 189.5 157 61.1
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 1.5e-45 187.6 198 49.5
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.9e-45 187.2 205 49.3
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 8.9e-43 178.3 198 45.5
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 2.9e-41 173.3 121 71.1
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 2.7e-39 166.8 226 42.9
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.8e-36 156.8 165 52.1
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.9e-29 134.0 180 40.6
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 3.6e-28 129.8 220 40.0
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.1e-27 128.3 247 36.0
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 5.8e-26 122.5 240 37.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 3.2e-24 116.7 205 33.7
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.2e-23 114.8 128 42.2
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 5.6e-21 105.9 166 31.9
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 3.6e-20 103.2 90 55.6
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 7.6e-18 95.5 214 31.8
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 3.3e-13 80.1 204 29.9
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 6.2e-12 75.9 77 44.2
Cre03.g204900 Chlamydomonas reinhardtii HOM05D006765 ORTHO05D008554 9.3e-08 62.0 140 30.0
MSTRG.15811 Avicennia marina HOM05D006765 ORTHO05D008554 7.9e-07 58.9 173 31.2


User provided reference genes

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