Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 5.2e-69 264.2 130 100.0
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 4.1e-66 254.6 130 96.2
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.9e-64 248.4 130 93.8
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.5e-63 246.1 122 99.2
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.8e-61 239.2 127 91.3
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.2e-60 236.5 129 89.9
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.5e-60 236.1 127 89.8
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.7e-60 234.2 130 87.7
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 9.8e-60 233.4 127 88.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 2.2e-59 232.3 127 88.2
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 2.2e-59 232.3 127 89.0
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 2.8e-59 231.9 127 88.2
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 3.7e-59 231.5 127 88.2
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 4.8e-59 231.1 127 88.2
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 4.8e-59 231.1 127 88.2
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.1e-58 229.9 129 86.0
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.1e-58 229.9 127 87.4
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.4e-58 229.6 127 87.4
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.8e-58 229.2 127 86.6
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.4e-58 228.8 127 86.6
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 3.1e-58 228.4 127 88.2
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 4.1e-58 228.0 127 86.6
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 4.1e-58 228.0 130 84.6
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 5.4e-58 227.6 127 87.4
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 7.0e-58 227.3 127 86.6
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 9.1e-58 226.9 122 89.3
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 1.2e-57 226.5 127 86.6
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 1.6e-57 226.1 128 85.2
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.6e-57 226.1 125 87.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.6e-57 226.1 129 84.5
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.6e-57 226.1 127 85.8
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.7e-57 225.3 127 85.8
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 4.5e-57 224.6 125 88.8
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 7.7e-57 223.8 125 86.4
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.0e-56 223.4 125 86.4
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.0e-56 223.4 125 86.4
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.3e-56 223.0 127 85.0
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.3e-56 223.0 122 88.5
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.3e-56 222.2 125 84.8
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.8e-56 221.5 120 90.0
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 5.0e-56 221.1 125 85.6
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 5.0e-56 221.1 127 88.2
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 6.6e-56 220.7 127 85.8
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 6.6e-56 220.7 122 87.7
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 6.6e-56 220.7 125 84.8
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 6.6e-56 220.7 122 88.5
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 8.6e-56 220.3 124 87.1
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.1e-55 219.9 125 86.4
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.1e-55 219.9 125 84.0
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.5e-55 219.5 127 85.0
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.9e-55 219.2 123 85.4
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.9e-55 219.2 122 86.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 3.3e-55 218.4 127 84.3
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 3.3e-55 218.4 122 87.7
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 3.3e-55 218.4 125 83.2
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 4.2e-55 218.0 122 86.9
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 4.2e-55 218.0 122 86.9
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 4.2e-55 218.0 127 82.7
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 7.2e-55 217.2 125 84.8
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 7.2e-55 217.2 125 84.8
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 7.2e-55 217.2 125 84.0
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 9.5e-55 216.9 123 84.6
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 9.5e-55 216.9 124 86.3
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.2e-54 216.5 129 81.4
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.2e-54 216.5 122 86.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-54 216.1 122 85.2
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 1.6e-54 216.1 125 84.8
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.8e-54 215.3 129 80.6
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 3.6e-54 214.9 122 86.1
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 3.6e-54 214.9 124 85.5
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 3.6e-54 214.9 125 83.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 4.7e-54 214.5 128 81.2
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 8.0e-54 213.8 122 85.2
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.0e-53 213.4 123 85.4
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.4e-53 213.0 124 82.3
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.8e-53 212.6 123 82.9
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 1.8e-53 212.6 180 64.4
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 2.3e-53 212.2 122 84.4
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.3e-53 212.2 122 84.4
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.0e-53 211.5 127 81.1
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 6.8e-53 210.7 120 85.8
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.2e-52 209.9 125 80.8
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.5e-52 209.5 125 80.8
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 5.7e-52 207.6 120 83.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 5.7e-52 207.6 117 86.3
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 9.8e-52 206.8 164 66.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 9.8e-52 206.8 123 80.5
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 4.9e-51 204.5 139 77.0
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 4.9e-51 204.5 125 79.2
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.1e-50 203.4 124 78.2
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.8e-50 202.6 123 79.7
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 2.4e-50 202.2 162 66.7
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 2.4e-50 202.2 123 78.9
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.1e-50 201.8 124 79.0
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.7e-49 198.7 123 75.6
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.4e-45 186.4 122 73.0
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.3e-43 179.9 125 72.8
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.3e-43 179.9 99 88.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 1.1e-42 176.8 122 67.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.4e-42 175.6 122 68.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.0e-41 172.6 122 67.2
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 2.7e-41 172.2 122 66.4
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 6.0e-41 171.0 122 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 3.3e-39 165.2 106 73.6
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.5e-36 156.4 170 55.3
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 4.6e-33 144.8 82 82.9
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 3.3e-31 138.7 79 86.1
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.1e-30 136.0 79 82.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 5.8e-28 127.9 121 53.7
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.1e-26 123.6 79 75.9
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.3e-23 112.1 115 53.9
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 4.7e-22 108.2 129 46.5
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 3.8e-19 98.6 71 67.6
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.3e-16 90.1 135 45.9
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.9e-16 88.6 46 91.3
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.9e-16 88.6 46 91.3
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.9e-15 86.3 45 88.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.3e-13 78.2 55 69.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.3e-13 78.2 43 83.7
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 3.4e-12 75.5 114 41.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.7e-11 73.2 37 89.2
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.6e-06 56.6 42 57.1
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.6e-06 55.5 51 54.9


User provided reference genes

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